Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq53 107 3e-18 >seq53 Length=16508 Score = 107 bits (118), Expect = 3e-18 Identities = 191/274 (70%), Gaps = 6/274 (2%) Strand=Plus/Plus Query 99900 TGCCGTTTAATATTGC--GTCATACGCTTTGTTGATCCACATGTTTGCACAGCAG-GCTA 99956 |||||||||| ||||| || || |||||| ||| ||| ||| |||| |||||| || | Sbjct 11471 TGCCGTTTAACATTGCAAGTTATGCGCTTT--TGACCCATATGATTGCCCAGCAGTGCGA 11528 Query 99957 ACATGACCGTGGGTGATTTCGTCTGGTCTGGTGGTGACGTACATCTGTACAATAACCATC 100016 | || || || || ||| ||||||| || || ||||| ||| | || ||||||| Sbjct 11529 TCTGGAA-GTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTCCAACCATC 11587 Query 100017 TGGAACAAACCCGTACCCAGTTAGGTCGTGCCCCGCGTCCGTTACCTAAGCTGATTATCA 100076 |||| || |||||||| | | | || |||| | || |||| |||| | Sbjct 11588 TGGAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTTATCCGCTGCCGCAGCTTGTTATTA 11647 Query 100077 AACGTAAGCCAGACTCCATCTTCGAATATAAGTTTGAAGACTTCGAACTTGAAGGCTACG 100136 |||| ||||| || ||||| || || || || ||||| || ||||| ||| ||| Sbjct 11648 AACGGAAGCCGGATTCCATTTTTGATTACAAATTTGAGGATTTCGAGTTTGTGAACTATC 11707 Query 100137 ACCCGCATCCTGCAATCAAAGCACCGGTCGCGAT 100170 | | ||||| | ||| ||||| ||||| ||||| Sbjct 11708 AGCATCATCCGGGAATTAAAGCGCCGGTAGCGAT 11741 Score = 102 bits (112), Expect = 1e-16 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCAA 99262 ||||| || || || || ||| |||| | || || | |||| | || || |||| Sbjct 11008 GACCGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATCG 11067 Query 99263 GAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATTCACGAACTG 99322 ||||| |||||||||||||| || || || || || || || |||| ||||| Sbjct 11068 GAAGGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACTT 11127 Query 99323 CTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACTATT 99382 || |||||||| || || |||||||| | ||| | |||| ||||| || | ||| Sbjct 11128 CTCTGGTTCCTTAAGGGAGATACCAACATATCCTATCTGCATGAGAATGGAGTTTCCATT 11187 Query 99383 TGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGGCGG 99442 ||||| |||||| | | | | || || || |||||||| ||||| |||||||| Sbjct 11188 TGGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGGCTCCCAGTGGCGC 11247 Query 99443 TCTTGG 99448 || ||| Sbjct 11248 TCCTGG 11253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716462513337200