Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq53 122 1e-22 >seq53 Length=16508 Score = 122 bits (134), Expect = 1e-22 Identities = 211/305 (69%), Gaps = 4/305 (1%) Strand=Plus/Plus Query 99468 ATGAAACAATATTTGGAATTAATGAGTAAGGTTTTAAATGAAGGCGTTGTTAAAGGCGAC 99527 |||||| ||||||||| ||| || | || | || | || || | ||||| ||| Sbjct 10951 ATGAAAGCATATTTGGATTTACTGCAAGATATTCTCGATCATGGTGTGGAAAAAGGGGAC 11010 Query 99528 CGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTGGCTGAA 99587 || || || || || || ||||| | ||||| | || | || ||| || | | ||| Sbjct 11011 CGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATCGGAA 11070 Query 99588 GGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTCATGAACTCCTT 99647 |||||||| ||||| || || || || || || || || |||||||||| || Sbjct 11071 GGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACTTCTC 11130 Query 99648 TGGTTCCTGAAAGGGGATACCA--ATACCCAGTACCTGAAAGATAACGGCGTCACTATCT 99705 |||||||| || || ||||||| ||| || || ||| | || || || || | || | Sbjct 11131 TGGTTCCTTAAGGGAGATACCAACATATCC--TATCTGCATGAGAATGGAGTTTCCATTT 11188 Query 99706 GGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTGGCGGT 99765 || |||| |||| | ||||||||||| | |||||||| ||||| |||||||| | Sbjct 11189 GGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGGCTCCCAGTGGCGCT 11248 Query 99766 CTTGG 99770 | ||| Sbjct 11249 CCTGG 11253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734273676378960