Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq53 147 3e-30 >seq53 Length=16508 Score = 147 bits (162), Expect = 3e-30 Identities = 203/284 (71%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 201791 ATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCCGAC 201850 |||||| |||| |||| ||||||| ||| ||| ||| | || | | ||||| ||| Sbjct 10951 ATGAAAGCATATTTGGATTTACTGCAAGATATTCTCGATCATGGTGTGGAAAAAGGGGAC 11010 Query 201851 CGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGAA 201910 || || ||||| |||||| | || || || || |||||| | |||||| | || ||| Sbjct 11011 CGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATCGGAA 11070 Query 201911 GGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCTG 201970 |||||||||||||| || || ||| || || || || | | ||||| || || Sbjct 11071 GGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACTTCTC 11130 Query 201971 TGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGG 202030 |||||||| | ||| || |||||||| ||| || | || || || |||| ||| Sbjct 11131 TGGTTCCTTAAGGGAGATACCAACATATCCTATCTGCATGAGAATGGAGTTTCCATTTGG 11190 Query 202031 GACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGG 202074 || |||||||||||| | |||||||| | || ||||| ||||| Sbjct 11191 GATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGG 11234 Score = 132 bits (146), Expect = 8e-26 Identities = 215/306 (70%), Gaps = 10/306 (3%) Strand=Plus/Plus Query 202510 GCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATCGCGTCTTACGCCTTGCTGGT 202569 |||| || ||| | |||||||| | ||||||||||| || ||| || | || Sbjct 11445 GCGTTCTGTGGATACCTTCCTTGGACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGAC 11504 Query 202570 ACACATGTTTGCACAACAG-GCGAACATGGCGGTAGGCGACTTCGTCTGGACAGGTGGTG 202628 || ||| |||| || ||| |||| | ||| || || || ||| ||||| | || || | Sbjct 11505 CCATATGATTGCCCAGCAGTGCGATC-TGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAG 11563 Query 202629 ATACGCATCTGTACTCCAACCATCTGGAACAAGCTGACCTCCAACTTACCCGTGACCCTA 202688 | |||| | || |||||||||||||| || | | | ||| | || | || ||| Sbjct 11564 ACGTGCATATCTATTCCAACCATCTGGAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTT 11623 Query 202689 AACCGTTACCGAAGTTGGTTATCAAACGTAAGCCCGATTCCATCTTCGACTACAAATTCG 202748 | ||| | ||| || | ||||| ||||| ||||| |||||||| || || |||||||| | Sbjct 11624 ATCCGCTGCCGCAGCTTGTTATTAAACGGAAGCCGGATTCCATTTTTGATTACAAATTTG 11683 Query 202749 AAGACTTCGAGGTTGTCGATTA----CATTTCGCATCCGGCGATTAAAGCGCCCGTCGCG 202804 | || |||||| |||| | || ||| ||||||| ||||||||||| || ||| Sbjct 11684 AGGATTTCGAGTTTGTGAACTATCAGCAT----CATCCGGGAATTAAAGCGCCGGTAGCG 11739 Query 202805 ATCTAA 202810 || ||| Sbjct 11740 ATTTAA 11745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788001564893360