Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_031107.1
Length=246291
Score E
Sequences producing significant alignments: (Bits) Value
seq53 147 3e-30
>seq53
Length=16508
Score = 147 bits (162), Expect = 3e-30
Identities = 203/284 (71%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 201791 ATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCCGAC 201850
|||||| |||| |||| ||||||| ||| ||| ||| | || | | ||||| |||
Sbjct 10951 ATGAAAGCATATTTGGATTTACTGCAAGATATTCTCGATCATGGTGTGGAAAAAGGGGAC 11010
Query 201851 CGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGAA 201910
|| || ||||| |||||| | || || || || |||||| | |||||| | || |||
Sbjct 11011 CGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATCGGAA 11070
Query 201911 GGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCTG 201970
|||||||||||||| || || ||| || || || || | | ||||| || ||
Sbjct 11071 GGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACTTCTC 11130
Query 201971 TGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGG 202030
|||||||| | ||| || |||||||| ||| || | || || || |||| |||
Sbjct 11131 TGGTTCCTTAAGGGAGATACCAACATATCCTATCTGCATGAGAATGGAGTTTCCATTTGG 11190
Query 202031 GACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGG 202074
|| |||||||||||| | |||||||| | || ||||| |||||
Sbjct 11191 GATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGG 11234
Score = 132 bits (146), Expect = 8e-26
Identities = 215/306 (70%), Gaps = 10/306 (3%)
Strand=Plus/Plus
Query 202510 GCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATCGCGTCTTACGCCTTGCTGGT 202569
|||| || ||| | |||||||| | ||||||||||| || ||| || | ||
Sbjct 11445 GCGTTCTGTGGATACCTTCCTTGGACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGAC 11504
Query 202570 ACACATGTTTGCACAACAG-GCGAACATGGCGGTAGGCGACTTCGTCTGGACAGGTGGTG 202628
|| ||| |||| || ||| |||| | ||| || || || ||| ||||| | || || |
Sbjct 11505 CCATATGATTGCCCAGCAGTGCGATC-TGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAG 11563
Query 202629 ATACGCATCTGTACTCCAACCATCTGGAACAAGCTGACCTCCAACTTACCCGTGACCCTA 202688
| |||| | || |||||||||||||| || | | | ||| | || | || |||
Sbjct 11564 ACGTGCATATCTATTCCAACCATCTGGAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTT 11623
Query 202689 AACCGTTACCGAAGTTGGTTATCAAACGTAAGCCCGATTCCATCTTCGACTACAAATTCG 202748
| ||| | ||| || | ||||| ||||| ||||| |||||||| || || |||||||| |
Sbjct 11624 ATCCGCTGCCGCAGCTTGTTATTAAACGGAAGCCGGATTCCATTTTTGATTACAAATTTG 11683
Query 202749 AAGACTTCGAGGTTGTCGATTA----CATTTCGCATCCGGCGATTAAAGCGCCCGTCGCG 202804
| || |||||| |||| | || ||| ||||||| ||||||||||| || |||
Sbjct 11684 AGGATTTCGAGTTTGTGAACTATCAGCAT----CATCCGGGAATTAAAGCGCCGGTAGCG 11739
Query 202805 ATCTAA 202810
|| |||
Sbjct 11740 ATTTAA 11745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 788001564893360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |