Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq53 89.7 8e-13
seq110 84.2 3e-11
>seq53
Length=16508
Score = 89.7 bits (98), Expect = 8e-13
Identities = 160/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 196784 CTTCCTCGGTGTCCCGTTCAACATCGCTTCGTACGCTCTGTTGGTTCACATGGTGGCACA 196843
|||||| || | ||||| ||||| || || || || ||| || ||| | || ||
Sbjct 11460 CTTCCTTGGACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGACCCATATGATTGCCCA 11519
Query 196844 GCAGGTCAATATGGTGGCGGGTGATTTCGTCTGGACGGGCGGCGATACCCATCTGTACTC 196903
|||| | || ||| | || || ||| ||||| | || || || ||| | || ||
Sbjct 11520 GCAGTGCGATCTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTC 11579
Query 196904 TAACCATCTGGAACAGGCCACGTTGCAGCTCTCCCGTGTACCGCATGATCTGCCTAAGCT 196963
||||||||||| |||| | | ||| | || | | ||| || ||||| ||||
Sbjct 11580 CAACCATCTGGAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTTATCCGCTGCCGCAGCT 11639
Query 196964 CGTTATCAAACGTAAACCGGATTCCATTTTCGACTATAAGTTCGAAGATTTTGA 197017
||||| ||||| || |||||||||||||| || || || || || ||||| ||
Sbjct 11640 TGTTATTAAACGGAAGCCGGATTCCATTTTTGATTACAAATTTGAGGATTTCGA 11693
>seq110
Length=50150
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/63 (90%), Gaps = 1/63 (2%)
Strand=Plus/Plus
Query 4593 CTTAGCTCAGTTGGT-AGAGCGCACCCCTGATAAGGGTGAGGCCACTGGTTCAAGTCCAG 4651
||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||
Sbjct 18261 CTTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCAC 18320
Query 4652 TAG 4654
|||
Sbjct 18321 TAG 18323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770305601612560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |