Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq53 89.7 8e-13 seq110 84.2 3e-11 >seq53 Length=16508 Score = 89.7 bits (98), Expect = 8e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 196784 CTTCCTCGGTGTCCCGTTCAACATCGCTTCGTACGCTCTGTTGGTTCACATGGTGGCACA 196843 |||||| || | ||||| ||||| || || || || ||| || ||| | || || Sbjct 11460 CTTCCTTGGACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGACCCATATGATTGCCCA 11519 Query 196844 GCAGGTCAATATGGTGGCGGGTGATTTCGTCTGGACGGGCGGCGATACCCATCTGTACTC 196903 |||| | || ||| | || || ||| ||||| | || || || ||| | || || Sbjct 11520 GCAGTGCGATCTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTC 11579 Query 196904 TAACCATCTGGAACAGGCCACGTTGCAGCTCTCCCGTGTACCGCATGATCTGCCTAAGCT 196963 ||||||||||| |||| | | ||| | || | | ||| || ||||| |||| Sbjct 11580 CAACCATCTGGAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTTATCCGCTGCCGCAGCT 11639 Query 196964 CGTTATCAAACGTAAACCGGATTCCATTTTCGACTATAAGTTCGAAGATTTTGA 197017 ||||| ||||| || |||||||||||||| || || || || || ||||| || Sbjct 11640 TGTTATTAAACGGAAGCCGGATTCCATTTTTGATTACAAATTTGAGGATTTCGA 11693 >seq110 Length=50150 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 4593 CTTAGCTCAGTTGGT-AGAGCGCACCCCTGATAAGGGTGAGGCCACTGGTTCAAGTCCAG 4651 ||||||||||||||| |||||||||||||||||||||||||| | |||||| |||||| Sbjct 18261 CTTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCAC 18320 Query 4652 TAG 4654 ||| Sbjct 18321 TAG 18323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770305601612560