Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq53 143 1e-29 >seq53 Length=16508 Score = 143 bits (158), Expect = 1e-29 Identities = 401/613 (65%), Gaps = 2/613 (0%) Strand=Plus/Plus Query 51727 ATAATGGTGTCGAGAAGGGGGATCGGACGGGTGTAGGTACTCGATCGGTTTTCGGCGCTC 51786 || ||||||| || || ||||| ||||| ||| ||| || || || || ||| | Sbjct 10988 ATCATGGTGTGGAAAAAGGGGACCGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCC 11047 Query 51787 AACTTAGGTATGACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCC 51846 | ||| | | ||| || | || || ||||| | || || || || ||| | Sbjct 11048 AGCTTCGCTTTGATCTATCGGAAGGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGA 11107 Query 51847 CATCAGTGGTCGGGGAGTTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCC 51906 ||| || || || | || ||||| ||| ||| ||| ||| | | |||| | Sbjct 11108 AATCCGTTGTTCATGAACTTCTCTGGTTCCTTAAGGGAGATACCAACATATCCTATCTGC 11167 Query 51907 ATAAGTACGGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTG 51966 || || | || || ||||||||| |||||||||||||| || ||| | || || || | Sbjct 11168 ATGAGAATGGAGTTTCCATTTGGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGG 11227 Query 51967 TGTATGGTAAGCAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCC 52026 | || || |||||||| ||||| || | |||| | || || ||||| Sbjct 11228 TTTACGGCTCCCAGTGGCGCTCCTGGGAAGCGCCGGACGGCCGGAAGATTGACCAGATTG 11287 Query 52027 ATGAAGTCGTCAAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTT 52086 || | || | ||||||||| |||| || || || ||| | ||| || | Sbjct 11288 CTGCTTTGGTAGACGGCATTAAGAACAATCCGAATTCCCGCCGTCACCTGGTCAGCGCAT 11347 Query 52087 GGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCT 52146 ||||||| | || | ||| ||||| | | | || |||||| | || ||||||| Sbjct 11348 GGAATGTAGCGGAGATCGATAATATGAAGCTCCCGCCATGCCATTTTGTGTTTCAATTCT 11407 Query 52147 ATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGG 52206 |||| ||||| ||||| | || ||| || ||| |||| || | ||| | | Sbjct 11408 ATGTGGCTGACGGTAAATTGTCCTGCATGCTGACGATGCGTTCTGTGGATACCTTCCTTG 11467 Query 52207 GCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-T 52265 | | |||||||||||||| || ||| | | |||| ||| ||||||| | |||||| Sbjct 11468 GACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGACCCATATGATTGC-CCAGCAGTGC 11526 Query 52266 GGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCAT 52325 | || || || || || ||||| ||| | || || ||||| |||||||| ||||||| Sbjct 11527 GATCTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTCCAACCAT 11586 Query 52326 GTAGATCAGGTTA 52338 | || ||||||| Sbjct 11587 CTGGAGCAGGTTA 11599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190095625273260