Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq53 143 1e-29
>seq53
Length=16508
Score = 143 bits (158), Expect = 1e-29
Identities = 401/613 (65%), Gaps = 2/613 (0%)
Strand=Plus/Plus
Query 51727 ATAATGGTGTCGAGAAGGGGGATCGGACGGGTGTAGGTACTCGATCGGTTTTCGGCGCTC 51786
|| ||||||| || || ||||| ||||| ||| ||| || || || || ||| |
Sbjct 10988 ATCATGGTGTGGAAAAAGGGGACCGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCC 11047
Query 51787 AACTTAGGTATGACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCC 51846
| ||| | | ||| || | || || ||||| | || || || || ||| |
Sbjct 11048 AGCTTCGCTTTGATCTATCGGAAGGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGA 11107
Query 51847 CATCAGTGGTCGGGGAGTTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCC 51906
||| || || || | || ||||| ||| ||| ||| ||| | | |||| |
Sbjct 11108 AATCCGTTGTTCATGAACTTCTCTGGTTCCTTAAGGGAGATACCAACATATCCTATCTGC 11167
Query 51907 ATAAGTACGGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTG 51966
|| || | || || ||||||||| |||||||||||||| || ||| | || || || |
Sbjct 11168 ATGAGAATGGAGTTTCCATTTGGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGG 11227
Query 51967 TGTATGGTAAGCAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCC 52026
| || || |||||||| ||||| || | |||| | || || |||||
Sbjct 11228 TTTACGGCTCCCAGTGGCGCTCCTGGGAAGCGCCGGACGGCCGGAAGATTGACCAGATTG 11287
Query 52027 ATGAAGTCGTCAAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTT 52086
|| | || | ||||||||| |||| || || || ||| | ||| || |
Sbjct 11288 CTGCTTTGGTAGACGGCATTAAGAACAATCCGAATTCCCGCCGTCACCTGGTCAGCGCAT 11347
Query 52087 GGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCT 52146
||||||| | || | ||| ||||| | | | || |||||| | || |||||||
Sbjct 11348 GGAATGTAGCGGAGATCGATAATATGAAGCTCCCGCCATGCCATTTTGTGTTTCAATTCT 11407
Query 52147 ATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGG 52206
|||| ||||| ||||| | || ||| || ||| |||| || | ||| | |
Sbjct 11408 ATGTGGCTGACGGTAAATTGTCCTGCATGCTGACGATGCGTTCTGTGGATACCTTCCTTG 11467
Query 52207 GCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-T 52265
| | |||||||||||||| || ||| | | |||| ||| ||||||| | ||||||
Sbjct 11468 GACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGACCCATATGATTGC-CCAGCAGTGC 11526
Query 52266 GGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCAT 52325
| || || || || || ||||| ||| | || || ||||| |||||||| |||||||
Sbjct 11527 GATCTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTCCAACCAT 11586
Query 52326 GTAGATCAGGTTA 52338
| || |||||||
Sbjct 11587 CTGGAGCAGGTTA 11599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190095625273260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |