Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq85 95.1 1e-14 seq11 91.5 2e-13 >seq85 Length=75362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476 |||||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||| Sbjct 57889 TTTGTCCCAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCAGGGGTTC 57948 Query 157477 GAATCCAGCCTGAGACG 157493 |||||| ||| |||| Sbjct 57949 GAATCCCTTCTGGGACG 57965 >seq11 Length=15596 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 157419 TGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGA 157478 |||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| Sbjct 1699 TGTCCCAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCAGGGGTTCGA 1640 Query 157479 ATCCAGCCTGAGACG 157493 |||| ||| |||| Sbjct 1639 ATCCCTTCTGGGACG 1625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596305962662560