Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq114 152 5e-32 seq70 143 2e-29 seq67 111 1e-19 seq101 109 5e-19 >seq114 Length=793728 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| |||||||| ||||||||| ||||| || |||| | Sbjct 567725 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 567666 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| ||||| |||| ||||| ||||| | |||| Sbjct 567665 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 567606 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| ||||| || Sbjct 567605 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 567547 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || ||||| ||||| ||||| || ||||| Sbjct 567546 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567499 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||||| |||||||| ||||||||| || || || |||| | Sbjct 568181 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 568122 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| || || || |||||||| | |||| Sbjct 568121 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 568062 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| ||||| || Sbjct 568061 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 568003 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || ||||| ||||| ||||| || ||||| Sbjct 568002 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567955 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || ||||| ||||||||| || || ||||||| | Sbjct 567953 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 567894 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| || || |||| ||||||||||| | |||| Sbjct 567893 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 567834 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | || | || ||| | | | ||||| ||||| || Sbjct 567833 ATACCCTCCTTGTCC-TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 567775 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || ||||| ||||| ||||| |||||||| Sbjct 567774 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567727 >seq70 Length=566626 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || ||||| ||||||||| ||||| ||||||| | Sbjct 52130 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 52071 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| || || |||| ||||||||||| | |||| Sbjct 52070 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 52011 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | || | || ||| | | | ||||| ||||| || Sbjct 52010 ATACCCTCCTTGTCC-TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 51952 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || ||||| ||||| ||||| || ||||| Sbjct 51951 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51904 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || ||||| ||||||||| ||||| || |||| | Sbjct 51446 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 51387 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| ||||| || || || |||||||| | |||| Sbjct 51386 AGCGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 51327 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | || | || ||| | | | ||||| ||||| || Sbjct 51326 ATACCCTCCTTGTCC-TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 51268 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || ||||| ||||| ||||| || ||||| Sbjct 51267 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51220 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || ||||| ||||||||| || || ||||||| | Sbjct 51674 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 51615 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| || || |||| ||||||||||| | |||| Sbjct 51614 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 51555 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | || | || ||| | | | ||||| ||||| || Sbjct 51554 ATACCCTCCTTGTCC-TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 51496 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || ||||| ||||| ||||| || ||||| Sbjct 51495 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51448 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || ||||| ||||||||| ||||| || |||| | Sbjct 51902 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 51843 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| || || || || || |||||||| | |||| Sbjct 51842 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 51783 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| | || | || || | ||| | | | ||||| ||||| || Sbjct 51782 ATGCCCTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 51724 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || ||||| ||||| ||||| || ||||| Sbjct 51723 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51676 >seq67 Length=473732 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | |||| ||| || || |||||| || ||||| ||||||| Sbjct 308837 GCCACCTCGGAGGCGGAGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGC 308896 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || |||||||||||||||||||| || || || || ||||| | || Sbjct 308897 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGG 308956 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||| ||| || ||| ||| | | | |||||| |||||| | Sbjct 308957 GATGCCTTCCTTGTCTTGGATCTTGGTCTT-GACGTTGTCGATCGTGTCGGACGACTCGA 309015 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || ||||| || ||||| || ||||| || || || ||| || Sbjct 309016 CCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCCTG 309065 >seq101 Length=1000389 Score = 109 bits (120), Expect = 5e-19 Identities = 162/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || || |||||| |||||||| || |||| | Sbjct 688355 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCG 688414 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||||||||| || || || || ||||| | || Sbjct 688415 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 688474 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| ||| || ||| ||| | | | |||||| |||||| || Sbjct 688475 ATGCCTTCCTTGTCTTGGATCTTGGTCTT-GACGTTGTCGATCGTGTCGGACGACTCGAC 688533 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCA 41861 ||| | || || || || ||||| || ||||| || || || |||| Sbjct 688534 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 688580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303040719200