Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq66 98.7 7e-16
>seq66
Length=1115558
Score = 98.7 bits (108), Expect = 7e-16
Identities = 229/340 (67%), Gaps = 9/340 (3%)
Strand=Plus/Plus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
|||||||||| || | ||||| ||||| || || || || ||| | | | | |
Sbjct 234936 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 234995
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044
|| | || || || ||||| || || | |||||| || || | |||| ||||
Sbjct 234996 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCTG 235053
Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104
| || ||||||||||| || || ||||| || ||||| | ||| || || || || | |
Sbjct 235054 CGCCAAAATGCCTCCATTGGAACCCATAAACCGGTCCCAAATC-CCCTCTTCCCTATGAC 235112
Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164
|| |||| ||| || ||||| ||| ||||||||| |||||||||| | || ||
Sbjct 235113 CCAACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCC-- 235170
Query 102165 CTGCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAAC 102222
|| || || | ||| || || ||||||| | ||||| | ||||| || |
Sbjct 235171 CTTCTCGGACAATAATTTAGAATCGGTCGATCCTCGAACGAACCAAAGTAGTTCCTCGAT 235230
Query 102223 AACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGA 102262
| ||||| | ||| ||| |||| || || ||||| |||
Sbjct 235231 GATACCTCGCGTAAAGACTTTCTTGGTGGTCAAAAGGGGA 235270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250486754662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |