Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq66 98.7 7e-16 >seq66 Length=1115558 Score = 98.7 bits (108), Expect = 7e-16 Identities = 229/340 (67%), Gaps = 9/340 (3%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||| ||||| || || || || ||| | | | | | Sbjct 234936 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 234995 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044 || | || || || ||||| || || | |||||| || || | |||| |||| Sbjct 234996 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCTG 235053 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 | || ||||||||||| || || ||||| || ||||| | ||| || || || || | | Sbjct 235054 CGCCAAAATGCCTCCATTGGAACCCATAAACCGGTCCCAAATC-CCCTCTTCCCTATGAC 235112 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 || |||| ||| || ||||| ||| ||||||||| |||||||||| | || || Sbjct 235113 CCAACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCC-- 235170 Query 102165 CTGCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAAC 102222 || || || | ||| || || ||||||| | ||||| | ||||| || | Sbjct 235171 CTTCTCGGACAATAATTTAGAATCGGTCGATCCTCGAACGAACCAAAGTAGTTCCTCGAT 235230 Query 102223 AACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGA 102262 | ||||| | ||| ||| |||| || || ||||| ||| Sbjct 235231 GATACCTCGCGTAAAGACTTTCTTGGTGGTCAAAAGGGGA 235270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250486754662