Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq66 194 2e-44 seq95 152 5e-32 seq78 136 4e-27 seq89 127 2e-24 seq92 118 1e-21 >seq66 Length=1115558 Score = 194 bits (214), Expect = 2e-44 Identities = 177/223 (79%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 116647 GTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACAC 116706 |||||| ||||||||||| || || ||||||| ||| ||| ||||| |||||||||||| Sbjct 115364 GTACAAGAAGGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 115423 Query 116707 GAGCGACTGGGAGCGCTTGAACGA---CAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763 | ||||||||| | | | | | |||||||| | |||||| |||||| || || Sbjct 115424 GCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCTCGCACGTCCTCGC 115483 Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823 ||||||||||||| ||||||||||||||||||||| |||||||||| ||| || || Sbjct 115484 CTTTTTCGCCGCCTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGA 115543 Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| ||| |||||||| || ||||||||||| ||||| ||| Sbjct 115544 GGTCCAGTCAGCCGAGGCTCGATGCTTCTACGGTTTTCAAATC 115586 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 ||||| |||| || ||||||||||| || ||| | |||||||| |||| ||| |||| Sbjct 116083 TTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTAATGCCCGGATTGACCTTCTCCAAC 116142 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 ||||||||||| | |||||||| || || ||||||||| || Sbjct 116143 GAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTG 116186 >seq95 Length=1340552 Score = 152 bits (168), Expect = 5e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| |||||||| || ||||| |||| |||||| || | Sbjct 532945 ATGCAAATTTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAATCCTCG 532886 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || || | ||||| |||||||| ||| | ||||| Sbjct 532885 GACACGATTGACAACG-TCAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 532827 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||||| || || | ||||| ||| || ||||| Sbjct 532826 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 532767 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | ||||| || | ||| |||| Sbjct 532766 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 532731 Score = 149 bits (164), Expect = 6e-31 Identities = 164/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| |||||||| || ||||| |||| ||||| | | Sbjct 533173 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 533114 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || |||| ||||| |||||||| ||| | ||||| Sbjct 533113 GACACGATTGACAACG-TCAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 533055 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| ||||| ||||| || || | ||||| ||| || ||||| Sbjct 533054 ACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 532995 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | ||||| || | |||||||| Sbjct 532994 CATCCAGAAGGAGTCGACGCTTCACTTGGTGTTGCG 532959 Score = 149 bits (164), Expect = 6e-31 Identities = 164/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| |||||||| |||||||| |||| ||||| | | Sbjct 533401 ATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTCG 533342 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || |||| ||||| |||||||| ||| | ||||| Sbjct 533341 GACACGATTGACAACG-TCAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 533283 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| ||||| ||||| || || | ||||| ||| || ||||| Sbjct 533282 ACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 533223 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | ||||| || | |||||||| Sbjct 533222 CATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCG 533187 Score = 149 bits (164), Expect = 6e-31 Identities = 157/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| |||| ||||| || | Sbjct 804933 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804874 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| |||||||||||||| ||| | ||||| Sbjct 804873 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCA 804815 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 804814 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 804755 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| ||||||||| | |||||||| Sbjct 804754 CATTCAGAAGGAGTCGACGCTGCA 804731 Score = 145 bits (160), Expect = 8e-30 Identities = 156/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || ||||| |||| ||||| || | Sbjct 804705 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804646 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| |||||||||||||| ||| | ||||| Sbjct 804645 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCA 804587 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 804586 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 804527 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| ||||||||| | |||||||| Sbjct 804526 CATTCAGAAGGAGTCGACGCTGCA 804503 Score = 140 bits (154), Expect = 3e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || ||||| |||| ||||| || | Sbjct 804477 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804418 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| |||||||||||||| ||| | ||||| Sbjct 804417 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCA 804359 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 804358 ACAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTACAA 804299 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||| |||||| | |||||||| Sbjct 804298 TATCCAAAAGGAGTCGACGCTGCA 804275 >seq78 Length=594305 Score = 136 bits (150), Expect = 4e-27 Identities = 168/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 ||||||| || || || || ||||||||||| ||||||||| |||| ||||| | ||| Sbjct 306074 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 306133 Query 40751 ACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | |||| ||||| || || | ||||| || |||||||| | |||||| Sbjct 306134 ACACGATCGACAACG-TCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 306192 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| ||| ||||| ||||| || || | |||||| | |||||||||| Sbjct 306193 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 306252 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || ||| | || || || | ||| | ||| || | || || Sbjct 306253 ATCCAAAAAGAGTCGACTCTCCACTTGGTGCTCCGCCTGCGTGGTGG 306299 >seq89 Length=998246 Score = 127 bits (140), Expect = 2e-24 Identities = 151/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 |||||| || || || || || |||||||| || |||||| |||| ||||| | |||| Sbjct 823731 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 823672 Query 40752 CAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 || | | |||| ||||| || || | ||||| || |||||||| | ||||||| Sbjct 823671 CACGATCGACAACG-TCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 823613 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 |||| ||||||| || ||||| ||||| || || | |||||| | ||||||||||| Sbjct 823612 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 823553 Query 40871 TCCAGAAGGAGGCCACGCTGCA 40892 |||| |||||| |||| || || Sbjct 823552 TCCAAAAGGAGTCCACCCTCCA 823531 >seq92 Length=809976 Score = 118 bits (130), Expect = 1e-21 Identities = 167/234 (71%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| |||||||||| | ||| | ||||| || ||| ||| ||| ||| | ||||| Sbjct 384450 ATTTGGGCCATGTACAAACAAGCCCAAGCGTCCTTTTGGTCCGCCGAAGAGATCGACCTC 384509 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 || ||| ||||||| | | | | ||| || |||| ||| | || ||| Sbjct 384510 GGCAGCGACCTCCACGACTGGCACCACAAGCTCAACAACGACGAACGCTACTTTATCGCC 384569 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| ||||| |||||||| || || |||| || ||||| |||| ||| | Sbjct 384570 CACGTGCTCGCCTTCTTCGCCGCTTCAGATGGGGTCGTGAATGAGAACTTGGTTGAGAGG 384629 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| | ||||||||| | ||||||||| ||||||| || |||||||||||| Sbjct 384630 TTCTCAAGTGAGGTGCAGTTCGCCGAGGCGAGGTGCTTTTATGGCTTTCAGATC 384683 Score = 105 bits (116), Expect = 7e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 |||||| |||| ||||||||||| ||||| ||||||||||| ||||| ||||| |||| Sbjct 385145 TTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTCTTTCTCCAAC 385204 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 |||||||| ||| | ||||| ||||| ||| ||| || ||| | |||||| ||| Sbjct 385205 GAGCTCATATCCCGCGACGAAGGTCTTCATACCGAATTCGCCGTCCTCTTGTTCAGTCAT 385264 Query 117206 TTG 117208 ||| Sbjct 385265 TTG 385267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218156681120