Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq66 98.7 7e-16 >seq66 Length=1115558 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/229 (70%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 |||||||||| || | || || |||||||| || || | || | || | | | Sbjct 234936 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 234995 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAA--GACCTTGATATTCTG 97408 ||| | || ||||| || || || || ||||| | ||| | ||| ||| |||| Sbjct 234996 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCATCCTTGGCCGTCCT--ATACTCTG 235053 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 | |||||||||||||||||||| |||||||| ||||| | || || ||||| |||| || Sbjct 235054 CGCCAAAATGCCTCCATTGGAACCCATAAACCGGTCCCAAATC-CCCTCTTCCCTATGAC 235112 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 || |||| || || ||| | || |||||||| |||||||||| Sbjct 235113 CCAACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAAT 235161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783315318340