Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq54 87.8 4e-12 >seq54 Length=1353381 Score = 87.8 bits (96), Expect = 4e-12 Identities = 176/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || ||||||||||||| || | ||| || || || ||||| || Sbjct 17513 CCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCT 17454 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904 ||||| |||||| | | | ||||| || || ||||| || ||||| | | || Sbjct 17453 TCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGC-GT 17395 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| || || || || || || || |||||||| ||| || |||||||| | || Sbjct 17394 TCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTA 17335 Query 94965 TGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023 | | | ||| | ||||| ||| ||||| |||||||| || |||||||| | || Sbjct 17334 AGACTGCAAGACGCGCTCAATGTCGTGA-CCGTGGATGCCGACGGCGACACGCATGAGCA 17276 Query 95024 TGTCCTGAGGGCGCTC 95039 ||| ||| ||||| || Sbjct 17275 TGTGCTGCGGGCGTTC 17260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581945994710