Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq54 87.8 4e-12
>seq54
Length=1353381
Score = 87.8 bits (96), Expect = 4e-12
Identities = 176/256 (69%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || || || ||||||||||||| || | ||| || || || ||||| ||
Sbjct 17513 CCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCT 17454
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904
||||| |||||| | | | ||||| || || ||||| || ||||| | | ||
Sbjct 17453 TCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGC-GT 17395
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| || || || || || || || |||||||| ||| || |||||||| | ||
Sbjct 17394 TCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTA 17335
Query 94965 TGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023
| | | ||| | ||||| ||| ||||| |||||||| || |||||||| | ||
Sbjct 17334 AGACTGCAAGACGCGCTCAATGTCGTGA-CCGTGGATGCCGACGGCGACACGCATGAGCA 17276
Query 95024 TGTCCTGAGGGCGCTC 95039
||| ||| ||||| ||
Sbjct 17275 TGTGCTGCGGGCGTTC 17260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581945994710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |