Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq66 113 7e-20
seq54 91.5 2e-13
>seq66
Length=1115558
Score = 113 bits (124), Expect = 7e-20
Identities = 175/243 (72%), Gaps = 8/243 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||| | |||||| ||||| |||| ||||||||||| | ||||||| | || ||
Sbjct 115353 ATCTGGGCACAGTACAAGAAGGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACTTG 115412
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||||||||| || |||| ||||| || | | | || ||||| | || || ||
Sbjct 115413 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 115471
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||| | | ||||| || |||| |||||| || ||||||||||| || || | ||
Sbjct 115472 GCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCG 115531
Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254
||||||| ||| | ||| || | |||| ||| ||||| ||||| || ||||||||
Sbjct 115532 ATTCTCTGGTGAG--GTCCAGTCAGCCGAGG-CTCGATGCTTCTACGGTTTTCAAATCAT 115588
Query 125255 GAT 125257
|||
Sbjct 115589 GAT 115591
>seq54
Length=1353381
Score = 91.5 bits (100), Expect = 2e-13
Identities = 339/529 (64%), Gaps = 2/529 (0%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| |||||| || | | ||| | || || |||||| | | ||||| | | | ||
Sbjct 17560 ACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGCGCGC 17619
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
||||| || || ||||| || || || || || | || ||||| | || || |||
Sbjct 17620 TACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGG 17679
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| ||||| ||||| || | || | ||||| || ||| || || | ||
Sbjct 17680 CACGCTGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAGGAAGTCCGC 17739
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
|| | || | || | ||| |||||| | || ||| | |||||| |||| ||| | | |
Sbjct 17740 GCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCC 17799
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
| ||| | ||| || | ||||||| | | ||||| || ||| || |||
Sbjct 17800 GCCGGCGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGC 17859
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGAGT 97165
|||||||| ||| || | | ||||| | |||||||| | | | |||| |
Sbjct 17860 GAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGA-T 17918
Query 97166 CGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTA 97225
| || | | | || ||| | || || | ||| ||||| || ||||| | || |
Sbjct 17919 CCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTT 17978
Query 97226 CATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAA 97285
||| ||||||||||| ||| ||| || |||||| || | || || |||||
Sbjct 17979 CATGCTCTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGACGATCAA 18038
Query 97286 GGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
| || || ||||||| || || | |||||| | | |||||||||
Sbjct 18039 GTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAG 18087
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096
||||||||||| ||||||||| | || ||||| | |||||| || | ||||| ||
Sbjct 19005 ATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCGGCCGATCGA 19064
Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156
|||| || ||| |||||| |||||| |||| | || ||| ||||||| | | |
Sbjct 19065 GGTGCCTTCATCGACCAGTCGCAATCGCTCAACATCCAC-TTGTCGAGCCCGACGA-TGG 19122
Query 98157 CGTA--TGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACT 98214
|| | | || ||||| ||||| |||| ||||| || || |||||||| |||||||
Sbjct 19123 CGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGTATGTACT 19182
Query 98215 A 98215
|
Sbjct 19183 A 19183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057699355120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |