Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq95 89.7 1e-12
>seq95
Length=1340552
Score = 89.7 bits (98), Expect = 1e-12
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || || || | || || | || || || || || || |||
Sbjct 804509 GTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 804568
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||||| || || || || || ||||| ||||||||||| || ||
Sbjct 804569 GCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTG 804628
Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | || || | ||| || ||||| || || || ||||| || || || ||
Sbjct 804629 ACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804687
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 804688 CTTGACGAAGATCTGCAT 804705
Score = 84.2 bits (92), Expect = 5e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || || ||||| || || | || || | || || || || || || |||
Sbjct 804281 GTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCA 804340
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||||| || || || || || ||||| ||||||||||| || ||
Sbjct 804341 GCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTG 804400
Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | || || | ||| || ||||| || || || ||||| || || || ||
Sbjct 804401 ACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804459
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 804460 CTTGACGAAGATCTGCAT 804477
Score = 84.2 bits (92), Expect = 5e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || || || | || || | || || || || || || |||
Sbjct 804737 GTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 804796
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||||| || || || || || ||||| ||||||||||| || ||
Sbjct 804797 GCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTG 804856
Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | || || | ||| || ||||| || || || ||||| || || || ||
Sbjct 804857 ACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804915
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 804916 CTTGACGAAGATTTGCAT 804933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151396010128696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |