Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq95 89.7 1e-12 >seq95 Length=1340552 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || || | || || | || || || || || || ||| Sbjct 804509 GTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 804568 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||| || || || || || ||||| ||||||||||| || || Sbjct 804569 GCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTG 804628 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | ||| || ||||| || || || ||||| || || || || Sbjct 804629 ACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804687 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 804688 CTTGACGAAGATCTGCAT 804705 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || ||||| || || | || || | || || || || || || ||| Sbjct 804281 GTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCA 804340 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||| || || || || || ||||| ||||||||||| || || Sbjct 804341 GCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTG 804400 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | ||| || ||||| || || || ||||| || || || || Sbjct 804401 ACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804459 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 804460 CTTGACGAAGATCTGCAT 804477 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || || | || || | || || || || || || ||| Sbjct 804737 GTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 804796 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||| || || || || || ||||| ||||||||||| || || Sbjct 804797 GCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTG 804856 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | ||| || ||||| || || || ||||| || || || || Sbjct 804857 ACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804915 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 804916 CTTGACGAAGATTTGCAT 804933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396010128696