Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq54 206 7e-48
>seq54
Length=1353381
Score = 206 bits (228), Expect = 7e-48
Identities = 573/869 (66%), Gaps = 10/869 (1%)
Strand=Plus/Plus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|||||||||||||| ||| | |||||||| || | || ||||| | | || ||||
Sbjct 17260 GAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAG 17319
Query 363508 GCCGCGA-TTGAAA-CATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCC 363563
|||| ||| | | || || || | || | | | || || || |||||| ||||
Sbjct 17320 --CGCGTCTTGCAGTCTTACAACCTCAT--GTCCGAGCGCTACTTTACCCACGCCTCGCC 17375
Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAAT 363623
|| | | ||| || ||||| | | | || ||| | || || || || || | | ||
Sbjct 17376 GACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGAT 17435
Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683
|||||| ||||| || || || || | ||||| || |||| || || || || |||||
Sbjct 17436 GAAGGATGATTCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATCTCCAA 17495
Query 363684 GAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCG 363743
|| || || || || ||| | |||||||| | || ||| | |||||
Sbjct 17496 GACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGGCTCCTACATCGC 17555
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|||||| || |||||||| || | || |||||||| ||||| | |||| || ||
Sbjct 17556 CGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGC 17615
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| | ||||||||||| ||||| ||||| || || || || || || ||||||||
Sbjct 17616 GCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCC 17675
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAAT 363922
|| || || | |||||||| || || || || || || ||| || || ||||||
Sbjct 17676 GTGGCACGCTGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCAC-GGCAAGGAGGAAG 17734
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
| || || |||||||| |||| ||| || ||| || | || | || ||| |||| || |
Sbjct 17735 TCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCG 17794
Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
|||| | | ||| | ||||| ||||| |||| || || || ||| || |
Sbjct 17795 AGGCCGCCGGCGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCT 17854
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|| || || | || | | ||| || || ||| |||||| || || |
Sbjct 17855 ATGGCGAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAA 17914
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| || ||||| || ||||| |||| || || | || | ||| | || || || | |
Sbjct 17915 CGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACC 17974
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
||| ||| | ||||| || | ||| || || ||||| || ||||||| || |
Sbjct 17975 CCTTCATGCTCTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGACGA 18034
Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
| || | ||| | || |||||||| || || ||| | || || |||||| ||||
Sbjct 18035 TCAAGTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAGTGCGCCG 18094
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCG 364311
| || ||| | || ||||||||| | |||
Sbjct 18095 TCTGCAACTTGGCCTCGATCGCGTTGCCG 18123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350894726684
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |