Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq54 206 7e-48 >seq54 Length=1353381 Score = 206 bits (228), Expect = 7e-48 Identities = 573/869 (66%), Gaps = 10/869 (1%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 |||||||||||||| ||| | |||||||| || | || ||||| | | || |||| Sbjct 17260 GAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAG 17319 Query 363508 GCCGCGA-TTGAAA-CATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCC 363563 |||| ||| | | || || || | || | | | || || || |||||| |||| Sbjct 17320 --CGCGTCTTGCAGTCTTACAACCTCAT--GTCCGAGCGCTACTTTACCCACGCCTCGCC 17375 Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAAT 363623 || | | ||| || ||||| | | | || ||| | || || || || || | | || Sbjct 17376 GACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGAT 17435 Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683 |||||| ||||| || || || || | ||||| || |||| || || || || ||||| Sbjct 17436 GAAGGATGATTCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATCTCCAA 17495 Query 363684 GAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCG 363743 || || || || || ||| | |||||||| | || ||| | ||||| Sbjct 17496 GACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGGCTCCTACATCGC 17555 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 |||||| || |||||||| || | || |||||||| ||||| | |||| || || Sbjct 17556 CGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGC 17615 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | | ||||||||||| ||||| ||||| || || || || || || |||||||| Sbjct 17616 GCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCC 17675 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAAT 363922 || || || | |||||||| || || || || || || ||| || || |||||| Sbjct 17676 GTGGCACGCTGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCAC-GGCAAGGAGGAAG 17734 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | || || |||||||| |||| ||| || ||| || | || | || ||| |||| || | Sbjct 17735 TCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCG 17794 Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 |||| | | ||| | ||||| ||||| |||| || || || ||| || | Sbjct 17795 AGGCCGCCGGCGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCT 17854 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 || || || | || | | ||| || || ||| |||||| || || | Sbjct 17855 ATGGCGAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAA 17914 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 | || ||||| || ||||| |||| || || | || | ||| | || || || | | Sbjct 17915 CGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACC 17974 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 ||| ||| | ||||| || | ||| || || ||||| || ||||||| || | Sbjct 17975 CCTTCATGCTCTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGACGA 18034 Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 | || | ||| | || |||||||| || || ||| | || || |||||| |||| Sbjct 18035 TCAAGTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAGTGCGCCG 18094 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCG 364311 | || ||| | || ||||||||| | ||| Sbjct 18095 TCTGCAACTTGGCCTCGATCGCGTTGCCG 18123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350894726684