Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq95 95.1 1e-14
seq89 89.7 4e-13
>seq95
Length=1340552
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || |||| |||||||| ||||||||||| || ||||| |||||
Sbjct 804251 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCG 804310
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | ||||| | || ||||| || | || || || |||||||| ||
Sbjct 804311 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 804370
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||||||||| ||| | ||| || | | | | ||||| || |||
Sbjct 804371 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 804430
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||| || || |||||||| || ||||| || ||||||||
Sbjct 804431 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804477
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || |||| |||||||| |||||||| || |||||||| |||||
Sbjct 804479 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 804538
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | ||||| | || ||||| || | || || || |||||||| ||
Sbjct 804539 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 804598
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||||||||| ||| | ||| || | | | | ||||| || |||
Sbjct 804599 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 804658
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||| || || |||||||| || ||||| || ||||||||
Sbjct 804659 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804705
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || |||| |||||||| |||||||| || |||||||| |||||
Sbjct 804707 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCG 804766
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | ||||| | || ||||| || | || || || |||||||| ||
Sbjct 804767 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 804826
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||||||||| ||| | ||| || | | | | ||||| || |||
Sbjct 804827 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 804886
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||| || || |||||||| || ||||| || || |||||
Sbjct 804887 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 804933
>seq89
Length=998246
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || |||| || || |||||||||||||| |||||||||||||||
Sbjct 823507 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCC 823566
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||| | || ||||| ||| | || || || || ||||| ||
Sbjct 823567 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 823626
Query 16829 ACGCCCTCTTTGTC-GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||| || ||||| | | ||| | ||| || | | | | |||||| | |||
Sbjct 823627 ATGCCTTCCTTGTCTTGGATCTTGGT-CTTGACGTTGTCGATCGTGTCGGACGACTCGAC 823685
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGC 16933
|| | |||||| || || || || || || |||||||| || |||
Sbjct 823686 CTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 823731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087200204380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |