Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq95 120 3e-22
seq89 113 4e-20
>seq95
Length=1340552
Score = 120 bits (132), Expect = 3e-22
Identities = 167/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||||| || | ||||| |||| || ||||| ||
Sbjct 804477 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804418
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| | || || | ||| |||||||| || ||||| || ||
Sbjct 804417 GACACGATCGACAACGTCA---AGGCCAAGATTCAG-GACAAAGAGGGCATTCCCCCAGA 804362
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||| || | || || || ||||| || | || |||| ||||| | | ||||||
Sbjct 804361 CCAACAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTA 804302
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226
|||||| ||||| || || ||||| || || ||||| | || |||| |||
Sbjct 804301 CAATATCCAAAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGGA 804250
>seq89
Length=998246
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 25001 GCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGA 25060
|||||| ||||| |||||| | || || || | ||||| |||| || |||||||| ||
Sbjct 823731 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 823672
Query 25061 CACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACA 25120
||| ||||| | ||| || ||| ||||| ||||| || || || ||||| ||
Sbjct 823671 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 823612
Query 25121 GCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATAT 25180
|| | || ||||||||||| || | || |||| ||||| ||| ||| ||||| ||
Sbjct 823611 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 823552
Query 25181 TCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || ||||| || || || || ||
Sbjct 823551 CCAAAAGGAGTCCACCCTCCACTTGGTCCT 823522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327144448030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |