Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq54 279 5e-70 >seq54 Length=1353381 Score = 279 bits (308), Expect = 5e-70 Identities = 619/925 (67%), Gaps = 8/925 (1%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| ||||||||| ||||||||| || ||| || ||| | || || || |||| | Sbjct 17194 TACAATTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 17253 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| |||| || ||||| |||||| Sbjct 17254 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 17313 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | || |||| | ||| || |||| || | | || |||| ||| Sbjct 17314 ATTGAGCGCGTCTTGCAGTCTTACAACCTCATGTCCGA---GCGCTACTTTACCCACGCC 17370 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || || ||||||||| | Sbjct 17371 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTC 17430 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| || || || || |||| ||||| |||||| || ||| |||| Sbjct 17431 ACGATGAAGGATGATTCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATC 17490 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 17491 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGGCTCCTAC 17550 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || || ||| ||| |||||| ||||||| |||||||| |||| ||||||| Sbjct 17551 ATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAAC 17610 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 ||||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 17611 ACGGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 17670 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || ||||| |||||||| || Sbjct 17671 GAGCCGTGGCACGCTGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAG 17730 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| || |||||| | || || || || ||| | || Sbjct 17731 GAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGT 17790 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || ||| ||| || || ||| ||| ||||| || ||| Sbjct 17791 GTCGAGGCCGCCGGCGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAA 17850 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || | ||| | ||| | | ||||| | |||||| | ||||| |||| Sbjct 17851 GTCTATGGCGAAGAGTTCCG-CGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAA 17909 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| || || ||||| ||| | || | || | ||||| || || || Sbjct 17910 GAAAACGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGG 17969 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | ||||||| | | ||| || || ||||| || |||| || Sbjct 17970 CAACCCCTTCATGCTCTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGG 18029 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 | ||||||| ||||| ||||||||||||| ||||||| | | ||||||||| Sbjct 18030 GACGATCAAGTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAGTG 18089 Query 94614 TGCTGTGTGTAACCTGGGCTCCATC 94638 || || || ||| ||| ||| ||| Sbjct 18090 CGCCGTCTGCAACTTGGCCTCGATC 18114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722198185520