Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq54 203 4e-47
seq92 123 3e-23
seq71 96.9 4e-15
>seq54
Length=1353381
Score = 203 bits (224), Expect = 4e-47
Identities = 561/851 (66%), Gaps = 17/851 (2%)
Strand=Plus/Minus
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
||||| || |||| || || || | | ||| ||| | | |||||| || || ||
Sbjct 18116 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCG 18057
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| ||||| || || ||| || || || | ||||||||| ||||| || ||||
Sbjct 18056 GTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCG 17997
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|| |||||||||||||| | || | || || || |||| || |||||| || | |
Sbjct 17996 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 17937
Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 17936 CAAAGCTTTTGCG-CGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 17878
Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGA 116728
| ||| |||||||| || | || || | | || || || || | | || ||||
Sbjct 17877 CAAGGCGCGGAACTCTTCGCC-ATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGA 17819
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
|||||| ||| | || | |||| || |||| ||||||||| || || ||||||||||
Sbjct 17818 AGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCG 17759
Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848
| |||||||||| ||| ||| |||| || | || ||||| || | |||| |
Sbjct 17758 CAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGA 17699
Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG-- 116906
| || | || || ||||||||||| || ||||| | ||||| | || | ||||
Sbjct 17698 ACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCT 17642
Query 116907 ----ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962
||| | |||| || || | |||||| ||| | || || ||||| || | ||
Sbjct 17641 TGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGA 17582
Query 116963 TACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTG 117020
| || | || | ||| || || || ||| || ||| | | | || | || | |||
Sbjct 17581 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCC--GGTTGCGCGGATGTTGTG 17524
Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080
|||| || ||| ||||| || || ||| ||||| | |||||| | |||| || |
Sbjct 17523 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTC 17464
Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140
||| || || || ||||| ||| |||| | | || ||||| ||| ||| | || ||
Sbjct 17463 GTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGG 17404
Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 117200
|| || || ||||||||||| || || | |||||| | || | | ||||||
Sbjct 17403 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACAT 17344
Query 117201 CTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCG 117260
| ||| | || |||||| |||||| | ||||| || |||| | ||| ||
Sbjct 17343 GAGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACG 17284
Query 117261 CATAAACATGT 117271
||| | |||||
Sbjct 17283 CATGAGCATGT 17273
>seq92
Length=809976
Score = 123 bits (136), Expect = 3e-23
Identities = 302/447 (68%), Gaps = 17/447 (4%)
Strand=Plus/Plus
Query 176546 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 176601
||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||||
Sbjct 127455 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 127513
Query 176602 GAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATC 176661
| || || | |||| | || | |||| ||| |||||||| || || || |||||
Sbjct 127514 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATATGCGATCCATC 127573
Query 176662 GTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 176721
|| ||| ||| | ||| ||||||||| || || || ||| | || || ||
Sbjct 127574 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 127633
Query 176722 ATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 176781
| | || || || || |||||||| |||| ||||| | ||||| ||| || | |||
Sbjct 127634 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 127689
Query 176782 -GAGTTGCGCCA---CTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACA 176837
||| | || | | || || || || || |||| || || | |||||| |
Sbjct 127690 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 127749
Query 176838 CACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 176897
|||| |||| || ||||| || |||| ||||| | || ||||| | ||| |||||||
Sbjct 127750 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 127809
Query 176898 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 176955
| || || |||| ||||||||| ||||| || | | | ||| || || ||||||||
Sbjct 127810 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 127867
Query 176956 ATCGTCCAACTTGGGAATACCAGTAAT 176982
||| || | |||| || ||| || ||
Sbjct 127868 ATCTTCGAGCTTGACAAGACCCGTGAT 127894
>seq71
Length=189300
Score = 96.9 bits (106), Expect = 4e-15
Identities = 266/408 (65%), Gaps = 0/408 (0%)
Strand=Plus/Minus
Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500
|| ||||| || | || ||| ||| || || || || |||| ||| ||| |
Sbjct 139408 TACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAGACG 139349
Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 10560
|||||||| || || || || || || ||| | ||| | || ||| | ||
Sbjct 139348 ACGCCCTTTTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATTGTC 139289
Query 10561 AAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAG 10620
||||| || ||||| | || || | | | |||| |||||| | ||||||||||||
Sbjct 139288 AAGAACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCACGAG 139229
Query 10621 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAATC 10680
|| || |||||||| | || || || | ||||||| || | | || | |||
Sbjct 139228 TCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATCTCCCGAGCTGTCGCCGAGATC 139169
Query 10681 GTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGA 10740
| ||| | ||| | | | | | || || | | ||| || | || ||||||
Sbjct 139168 TCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTGGGGA 139109
Query 10741 CACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGACGAA 10800
|||||| ||||| || || | |||||| | | || ||||| || | |||||
Sbjct 139108 CACGCCGCCGACTACGTCGAGGGTATGTGGAGGATGATGCAGCAAGACAAGCCCGACGAC 139049
Query 10801 TATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848
| |||| |||||||||| ||||| ||| | |||| |||||||||||||
Sbjct 139048 TTTGTCCTCGCGACGGGTGAGACCCACCCTGTCAAGGAGTTCGTTGAG 139001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505957647920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |