Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq54 203 4e-47 seq92 123 3e-23 seq71 96.9 4e-15 >seq54 Length=1353381 Score = 203 bits (224), Expect = 4e-47 Identities = 561/851 (66%), Gaps = 17/851 (2%) Strand=Plus/Minus Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 18116 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCG 18057 Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550 || ||||| || || ||| || || || | ||||||||| ||||| || |||| Sbjct 18056 GTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCG 17997 Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 || |||||||||||||| | || | || || || |||| || |||||| || | | Sbjct 17996 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 17937 Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 17936 CAAAGCTTTTGCG-CGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 17878 Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGA 116728 | ||| |||||||| || | || || | | || || || || | | || |||| Sbjct 17877 CAAGGCGCGGAACTCTTCGCC-ATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGA 17819 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 |||||| ||| | || | |||| || |||| ||||||||| || || |||||||||| Sbjct 17818 AGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCG 17759 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 | |||||||||| ||| ||| |||| || | || ||||| || | |||| | Sbjct 17758 CAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGA 17699 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG-- 116906 | || | || || ||||||||||| || ||||| | ||||| | || | |||| Sbjct 17698 ACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCT 17642 Query 116907 ----ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962 ||| | |||| || || | |||||| ||| | || || ||||| || | || Sbjct 17641 TGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGA 17582 Query 116963 TACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTG 117020 | || | || | ||| || || || ||| || ||| | | | || | || | ||| Sbjct 17581 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCC--GGTTGCGCGGATGTTGTG 17524 Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080 |||| || ||| ||||| || || ||| ||||| | |||||| | |||| || | Sbjct 17523 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTC 17464 Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140 ||| || || || ||||| ||| |||| | | || ||||| ||| ||| | || || Sbjct 17463 GTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGG 17404 Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 117200 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 17403 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACAT 17344 Query 117201 CTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCG 117260 | ||| | || |||||| |||||| | ||||| || |||| | ||| || Sbjct 17343 GAGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACG 17284 Query 117261 CATAAACATGT 117271 ||| | ||||| Sbjct 17283 CATGAGCATGT 17273 >seq92 Length=809976 Score = 123 bits (136), Expect = 3e-23 Identities = 302/447 (68%), Gaps = 17/447 (4%) Strand=Plus/Plus Query 176546 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 176601 ||||||| ||||||| ||| || || | | | ||| | | || ||| || |||||| Sbjct 127455 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 127513 Query 176602 GAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATC 176661 | || || | |||| | || | |||| ||| |||||||| || || || ||||| Sbjct 127514 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATATGCGATCCATC 127573 Query 176662 GTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 176721 || ||| ||| | ||| ||||||||| || || || ||| | || || || Sbjct 127574 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 127633 Query 176722 ATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 176781 | | || || || || |||||||| |||| ||||| | ||||| ||| || | ||| Sbjct 127634 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 127689 Query 176782 -GAGTTGCGCCA---CTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACA 176837 ||| | || | | || || || || || |||| || || | |||||| | Sbjct 127690 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 127749 Query 176838 CACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 176897 |||| |||| || ||||| || |||| ||||| | || ||||| | ||| ||||||| Sbjct 127750 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 127809 Query 176898 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 176955 | || || |||| ||||||||| ||||| || | | | ||| || || |||||||| Sbjct 127810 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 127867 Query 176956 ATCGTCCAACTTGGGAATACCAGTAAT 176982 ||| || | |||| || ||| || || Sbjct 127868 ATCTTCGAGCTTGACAAGACCCGTGAT 127894 >seq71 Length=189300 Score = 96.9 bits (106), Expect = 4e-15 Identities = 266/408 (65%), Gaps = 0/408 (0%) Strand=Plus/Minus Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500 || ||||| || | || ||| ||| || || || || |||| ||| ||| | Sbjct 139408 TACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAGACG 139349 Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 10560 |||||||| || || || || || || ||| | ||| | || ||| | || Sbjct 139348 ACGCCCTTTTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATTGTC 139289 Query 10561 AAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAG 10620 ||||| || ||||| | || || | | | |||| |||||| | |||||||||||| Sbjct 139288 AAGAACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCACGAG 139229 Query 10621 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAATC 10680 || || |||||||| | || || || | ||||||| || | | || | ||| Sbjct 139228 TCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATCTCCCGAGCTGTCGCCGAGATC 139169 Query 10681 GTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGA 10740 | ||| | ||| | | | | | || || | | ||| || | || |||||| Sbjct 139168 TCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTGGGGA 139109 Query 10741 CACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGACGAA 10800 |||||| ||||| || || | |||||| | | || ||||| || | ||||| Sbjct 139108 CACGCCGCCGACTACGTCGAGGGTATGTGGAGGATGATGCAGCAAGACAAGCCCGACGAC 139049 Query 10801 TATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848 | |||| |||||||||| ||||| ||| | |||| ||||||||||||| Sbjct 139048 TTTGTCCTCGCGACGGGTGAGACCCACCCTGTCAAGGAGTTCGTTGAG 139001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505957647920