Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq54 91.5 2e-13
>seq54
Length=1353381
Score = 91.5 bits (100), Expect = 2e-13
Identities = 163/229 (71%), Gaps = 7/229 (3%)
Strand=Plus/Minus
Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACA 203894
|||||| || || ||||||| || || ||||| ||| || | | || |||||||
Sbjct 19235 GTCTTGGTCGACGGTGAACTTGATCGCACCGACGGC-GGCGCGCGTGCGCAAGTAGTACA 19177
Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CG 203953
| || ||||| || || || ||| ||||| | |||||| || | || | || ||
Sbjct 19176 TACCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGCCATCG 19117
Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATC 204012
| ||| ||| | | ||| ||||| || || || ||||||||| ||||| || |||||
Sbjct 19116 TCGGGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCACCTCGATC 19059
Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
|| | || || |||||| ||||| ||||| | |||||| || ||||||
Sbjct 19058 GGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 19010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153589810720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |