Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq54 91.5 2e-13 >seq54 Length=1353381 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/229 (71%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACA 203894 |||||| || || ||||||| || || ||||| ||| || | | || ||||||| Sbjct 19235 GTCTTGGTCGACGGTGAACTTGATCGCACCGACGGC-GGCGCGCGTGCGCAAGTAGTACA 19177 Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CG 203953 | || ||||| || || || ||| ||||| | |||||| || | || | || || Sbjct 19176 TACCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGCCATCG 19117 Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATC 204012 | ||| ||| | | ||| ||||| || || || ||||||||| ||||| || ||||| Sbjct 19116 TCGGGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCACCTCGATC 19059 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || | || || |||||| ||||| ||||| | |||||| || |||||| Sbjct 19058 GGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 19010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153589810720