Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq89 147 5e-30
seq78 147 5e-30
seq95 127 5e-24
>seq89
Length=998246
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | |||||| || ||||||||||||| ||||||||| ||||| || | |||||
Sbjct 823522 AGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 823581
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||| ||||||||||| |||||||| || || ||||| ||
Sbjct 823582 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 823641
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||||| | | || || || | |||||||||
Sbjct 823642 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 823701
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| ||||| || ||||| |||||
Sbjct 823702 TTGCCCGTAAGAGTCTTGACAAAGATTTG 823730
>seq78
Length=594305
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||||||||||||||| ||||||| ||||||||| ||||| || | |||||
Sbjct 306284 AGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 306225
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||||||||||||||| |||||||| || || ||||| ||
Sbjct 306224 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 306165
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||||| | | || || || | ||||| |||
Sbjct 306164 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 306105
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || || ||||| |||||
Sbjct 306104 TTGCCCGTGAGGGTCTTGACAAAGATTTG 306076
>seq95
Length=1340552
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || | |||||| ||||||||||| |||| |||||| || || | ||
Sbjct 532725 CGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTG 532784
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || |||||||||||||| || ||||| || ||| ||
Sbjct 532785 CGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCC 532844
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || ||||| ||| ||| || | ||||| | | ||| || || | |
Sbjct 532845 TCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCCGAGGATTCGACCTCGAGC 532904
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| ||||| || || || || ||||||||
Sbjct 532905 GTGATCGTCTTGCCCGTAAGCGTCTTGACGAAAATTTG 532942
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || |||||||||||||||| ||||| || || | || | |||||
Sbjct 804266 AGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCATCC 804325
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||||||||| || ||||| || ||| || ||| |||
Sbjct 804326 TCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCC 804385
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||||| | | || || || | ||||||||||
Sbjct 804386 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 804445
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || || || ||
Sbjct 804446 TTGCCGGTCAGGGTCTTGACGAAGATCTG 804474
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| || | |||||| || || | || | |||||
Sbjct 804722 AGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCC 804781
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||||||||| || ||||| || ||| || ||| |||
Sbjct 804782 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCC 804841
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||||| | | || || || | ||||||||||
Sbjct 804842 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 804901
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || || |||||
Sbjct 804902 TTGCCGGTCAGGGTCTTGACGAAGATTTG 804930
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| || | |||||| || || | || | |||||
Sbjct 804494 AGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCC 804553
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||||||||| || ||||| || ||| || ||| |||
Sbjct 804554 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCC 804613
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||||| | | || || || | ||||||||||
Sbjct 804614 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 804673
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || || || ||
Sbjct 804674 TTGCCGGTCAGGGTCTTGACGAAGATCTG 804702
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| || ||||||||||| |||| |||||| || || | || | ||||| || |||||
Sbjct 532970 GTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTG 533029
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
||| || |||||||| | || || ||||| || ||| || || |||||||||||
Sbjct 533030 CTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 533089
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||| ||| || | ||||| | | || || || | |||||||||||| |||||
Sbjct 533090 GGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGT 533149
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
|| || || || || |||||
Sbjct 533150 AAGCGTCTTGACGAAGATTTG 533170
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
|||||| ||||||||||| |||| |||||| || || | || | ||||| || |||||
Sbjct 533198 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTG 533257
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
||| || |||||||| | || || ||||| || ||| || || |||||||||||
Sbjct 533258 CTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 533317
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||| ||| || | ||||| | | || || || | |||||| ||||| |||||
Sbjct 533318 GGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCCGT 533377
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
|| || || || || || ||
Sbjct 533378 AAGCGTCTTAACGAAGATCTG 533398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178919153000854
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