Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq66 185 9e-42
seq95 154 1e-32
seq78 136 4e-27
seq89 118 1e-21
seq92 91.5 1e-13
>seq66
Length=1115558
Score = 185 bits (204), Expect = 9e-42
Identities = 175/223 (78%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
||||||||| ||||| ||||| || |||||| | ||| || || || ||| |||||
Sbjct 115586 GATTTGAAAACCGTAGAAGCATCGAGCCTCGGCTGACTGGACCTCACCAGAGAATCGCTC 115527
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
||||| || |||||||||||||||||| ||||||||||||||| || |||||| |||
Sbjct 115526 GACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGAT 115467
Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
||| | |||||||| | | | | | ||||||||| || |||||||||||| |||
Sbjct 115466 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 115407
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437
|| ||| ||| |||||||||| || |||||||| || ||||||
Sbjct 115406 CATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCCTTCTTGTAC 115364
Score = 89.7 bits (98), Expect = 5e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||||| | ||||||||||||| || | ||||||||| | || ||||| ||||||
Sbjct 116196 GAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 116137
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998
||| ||||| |||||||| | ||| || || |||||||| || |||| |||||
Sbjct 116136 GAAGGTCAATCCGGGCATTAAGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAA 116083
>seq95
Length=1340552
Score = 154 bits (170), Expect = 1e-32
Identities = 167/218 (77%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||| |||||||| || ||||| |||| ||||| || |
Sbjct 532945 ATGCAAATTTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAATCCTCG 532886
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || |||| ||||| ||||| |||||| | ||||
Sbjct 532885 GACACGATTGACAACG--TCAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACC 532828
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
|||| || ||||| | ||| ||||| ||||| || || | ||||| ||| || ||||
Sbjct 532827 AACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACA 532768
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || ||||||||||||
Sbjct 532767 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGT 532730
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 804477 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804418
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||||||||| |||||| | |||||
Sbjct 804417 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCA 804359
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || ||||| | ||| ||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 804358 ACAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTACAA 804299
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||| |||||||||| |||||||| ||| | |||||||
Sbjct 804298 TATCCAAAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGG 804251
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 804933 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804874
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||||||||| |||||| | |||||
Sbjct 804873 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCA 804815
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || ||||| | ||| ||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 804814 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 804755
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 804754 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 804707
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 804705 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804646
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||||||||| |||||| | |||||
Sbjct 804645 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCA 804587
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || ||||| | ||| ||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 804586 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 804527
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 804526 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 804479
Score = 136 bits (150), Expect = 4e-27
Identities = 163/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||| |||||||| || ||||| |||| |||||| | |
Sbjct 533173 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 533114
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| ||||| |||||| | ||||
Sbjct 533113 GACACGATTGACAACG--TCAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACC 533056
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
|||| || | || | ||| ||||| ||||| || || | ||||| ||| || ||||
Sbjct 533055 AACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACA 532996
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || |||||| |||||
Sbjct 532995 ACATCCAGAAGGAGTCGACGCTTCACTTGGTGTTGCGT 532958
Score = 136 bits (150), Expect = 4e-27
Identities = 163/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| |||||||| |||||||| |||| |||||| | |
Sbjct 533401 ATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTCG 533342
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| ||||| |||||| | ||||
Sbjct 533341 GACACGATTGACAACG--TCAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACC 533284
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
|||| || | || | ||| ||||| ||||| || || | ||||| ||| || ||||
Sbjct 533283 AACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACA 533224
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || |||||| |||||
Sbjct 533223 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGT 533186
>seq78
Length=594305
Score = 136 bits (150), Expect = 4e-27
Identities = 163/216 (75%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || ||||||||||| ||||||||| |||| |||||| | |||
Sbjct 306074 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 306133
Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
||| || | | | | |||| || |||| ||||| || || || |||||| |||||
Sbjct 306134 ACA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCA 306191
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | ||| ||||| ||||| || || | |||||| | |||||||||
Sbjct 306192 GCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAA 306251
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| || |||| || || |||||||| ||
Sbjct 306252 CATCCAAAAAGAGTCGACTCTCCACTTGGTGCTCCG 306287
>seq89
Length=998246
Score = 118 bits (130), Expect = 1e-21
Identities = 166/228 (73%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305
|||||| || || || || || |||||||| || |||||| |||| |||||| | ||||
Sbjct 823731 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 823672
Query 38306 CAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363
|| || | | | | |||| || |||| ||||| || || || |||||| |||||
Sbjct 823671 CA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 823614
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | || ||||| ||||| || || | |||||| | ||||||||||
Sbjct 823613 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 823554
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||||| | || || || ||||| || || | |||| |||
Sbjct 823553 ATCCAAAAGGAGTCCACCCTCCACTTGGTCCTCCGCCTCCGAGGTGGC 823506
>seq92
Length=809976
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935
|||||| |||||| | | || || ||| ||| | || ||||| | ||| |||||
Sbjct 385267 CAAATGACTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGATATGAG 385208
Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995
|||||| ||||| | ||| ||||||||||| ||||||||||||||||| |||| |||
Sbjct 385207 CTCGTTGGAGAAAGAGAGGCCAGGCATGAGGCCTCGTTTTTTGAGCCAAAAGATGGAGGC 385148
Query 132996 GAA 132998
|||
Sbjct 385147 GAA 385145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171787150080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |