Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq54 134 2e-26 >seq54 Length=1353381 Score = 134 bits (148), Expect = 2e-26 Identities = 449/691 (65%), Gaps = 7/691 (1%) Strand=Plus/Minus Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || || || |||||||| || ||| || || | |||||| || || ||||| | Sbjct 18062 ATCTCGGTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTG 18003 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 || || ||||| ||||||||| | ||| | |||||||| ||| | || |||||| Sbjct 18002 TTCGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATT 17943 Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 || | ||| | | | ||| |||||| ||| || ||| | || |||| ||||| || Sbjct 17942 GCGTACCAAAGCTTTTGCG-CGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTT 17884 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 | ||||| | || || | || || || || || || || | | |||| Sbjct 17883 CTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGG 17824 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 |||||||| | ||| | || | |||| || | || |||||| || || |||||||| Sbjct 17823 GCAGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCA 17764 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | ||| |||| || ||||| || | || || | || || || ||| || || Sbjct 17763 GAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTC 17704 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 || || || | || || | |||||| || ||||| |||| |||| || ||| ||| Sbjct 17703 CAGGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACG 17644 Query 110760 ACGAC--CCGCCT-GGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAAT 110816 || ||| ||| || ||||| || ||| ||| |||| | |||||| || | Sbjct 17643 CTTGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGAC 17584 Query 110817 AATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTG 110876 || || | || | || || || || || ||| | || || |||| ||| Sbjct 17583 GATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTG 17524 Query 110877 GATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTAC 110935 ||| || ||| |||||||| || ||| || | || ||| ||| |||| || Sbjct 17523 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCT-TGAGCGTGT 17465 Query 110936 CATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAG 110995 | ||||| || ||||||||||| |||| | | | || || || || || | ||| | Sbjct 17464 CGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCG 17405 Query 110996 GACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 | |||||||||| || |||||||| || || Sbjct 17404 GGTGAGGCGTTCCGGCGTTGAAGAGCGTCGG 17374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974807323600