Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq95 170 4e-37
seq78 145 2e-29
seq89 143 6e-29
>seq95
Length=1340552
Score = 170 bits (188), Expect = 4e-37
Identities = 160/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || ||||| ||||||||||| || || | ||||| ||||||||
Sbjct 804730 GTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 804789
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || |||||||||||||| |||||||| |||||||| ||||| ||
Sbjct 804790 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTT 804849
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || |||||||| || || || || || | |||||| || ||
Sbjct 804850 GGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 804909
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 804910 CAGGGTCTTGACGAAGATTTGCAT 804933
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | ||| || | |||||| || ||||| || || || |||||||| || || || |
Sbjct 532955 GAGACGCAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCG 533014
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| ||||||||||| || |||||||| | ||||||||||||||| |||||||| ||
Sbjct 533015 GCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTC 533074
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| ||||| || ||||||||| ||||| |||||||| || || || || ||
Sbjct 533075 CTTGTCCTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGT 533134
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||| || || | || || ||||| | ||||||
Sbjct 533135 GATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 533173
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| ||||| |||||||||||||| || || | ||||| || |||||
Sbjct 804274 GTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCAAGCTG 804333
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || |||||||||||||| |||||||| |||||||| ||||| ||
Sbjct 804334 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTT 804393
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || |||||||| || || || || || | |||||| || ||
Sbjct 804394 GGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 804453
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 804454 CAGGGTCTTGACGAAGATCTGCAT 804477
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || ||||| ||||||||||| || || | ||||| ||||||||
Sbjct 804502 GTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 804561
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || |||||||||||||| |||||||| |||||||| ||||| ||
Sbjct 804562 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTT 804621
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || |||||||| || || || || || | |||||| || ||
Sbjct 804622 GGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 804681
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 804682 CAGGGTCTTGACGAAGATCTGCAT 804705
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || |||||||| || || || | ||||| ||||||||
Sbjct 532742 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTG 532801
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || |||||||||||||| |||||||| || |||||||| || ||
Sbjct 532802 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 532861
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| ||||| |||||||| ||| || || || || | |||||| || ||
Sbjct 532862 GGTCTTGACGTTGTCAATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGTCTTGCCCGT 532921
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 532922 AAGCGTCTTGACGAAAATTTGCAT 532945
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | ||| || | ||| || || ||||| || || || |||||||| || || || |
Sbjct 533183 GAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCG 533242
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| ||||||||||| || |||||||| | ||||||||||||||| |||||||| ||
Sbjct 533243 GCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTC 533302
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| ||||| || ||||||||| ||||| |||||||| || || || || ||
Sbjct 533303 CTTGTCCTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGT 533362
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | || || ||||| | |||||
Sbjct 533363 GATGGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 533401
>seq78
Length=594305
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||||||||| || ||||| ||||| | || | ||||| ||||||||
Sbjct 306276 GTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTG 306217
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || ||||| |||||||| || |||||||| |||||||| || ||
Sbjct 306216 CTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 306157
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || ||||| || || || || ||||| | ||||| || ||
Sbjct 306156 GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 306097
Query 195117 CAAAGTTTTTACGAACACTTGCA 195139
| || || || || | |||||
Sbjct 306096 GAGGGTCTTGACAAAGATTTGCA 306074
>seq89
Length=998246
Score = 143 bits (158), Expect = 6e-29
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| ||||| || ||||| ||||| | || | ||||| ||||||||
Sbjct 823530 GTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTG 823589
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || ||||| |||||||| || |||||||| |||||||| || ||
Sbjct 823590 CTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 823649
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || ||||| || || || || ||||| | |||||| || ||
Sbjct 823650 GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 823709
Query 195117 CAAAGTTTTTACGAACACTTGC 195138
| ||| || || || | ||||
Sbjct 823710 AAGAGTCTTGACAAAGATTTGC 823731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479297132254
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |