Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq54 136 7e-27
seq92 105 1e-17
>seq54
Length=1353381
Score = 136 bits (150), Expect = 7e-27
Identities = 775/1228 (63%), Gaps = 40/1228 (3%)
Strand=Plus/Minus
Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||| ||||| |||| || | || |||| ||||||||| || || |||| | |||||
Sbjct 18404 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 18345
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
||||| ||||| || || ||| |||||| || | |||| | || || ||
Sbjct 18344 AGCTTGCGCGCCTCGGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGA 18285
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || |||||||||||||| | ||| | | || || || | || ||| |
Sbjct 18284 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAATTGGAGTTCTGCGC-CTCGATGAC 18226
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
|| || | ||| ||||||||| ||| | |||| | | | || ||| ||| |
Sbjct 18225 AGGATAGTAATTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 18166
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489
| || ||| | | || |||| | |||| || | || ||| |||| ||||
Sbjct 18165 GTGCA---ACTTTTTA---AAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 18113
Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549
| ||||| |||||| ||||| ||| | | | | |||||| |||||||||||||
Sbjct 18112 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGC 18053
Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609
||| ||| | ||| || || ||||||| |||||||| || ||| || | |
Sbjct 18052 ACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGT 17993
Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669
|||||||||||||| ||||| || || || | ||||| | | || || | ||| |
Sbjct 17992 CCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAA 17933
Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTACTGTTCGT 213726
| | || || | | || | ||| | | ||| |||| | |||
Sbjct 17932 GCTTTTGCGCGGGGATCGTTTTCTTGGCG----CGGCCCT--CCTTTTCGTATTTCTCGA 17879
Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783
| | || ||| || | ||| |||| || || || || || | ||||| |
Sbjct 17878 ACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 17822
Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843
| | ||| ||| || ||| | | ||| | || |||||| || || || | ||| |
Sbjct 17821 AGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGA 17762
Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903
|||| ||| || || | | | || ||| || || ||||| || || |
Sbjct 17761 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCA 17702
Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960
| || ||||||| ||| |||||||||||||| | |||||| || ||||| || | ||
Sbjct 17701 GGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 17642
Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020
| ||||| || ||||| || | ||| ||||| ||| || || | ||| || |
Sbjct 17641 TGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGA 17582
Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080
||||| || | ||||| || || || || || ||||||| || | | |||| |
Sbjct 17581 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGA 17522
Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140
|| | || || ||||||||| ||||||||| | ||||| | | | || ||
Sbjct 17521 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGT 17462
Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200
||||| | || ||||| | | | | || ||| ||| ||| ||||| ||
Sbjct 17461 AAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGT 17402
Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTG---TTAGAGA 214257
| || || | |||||| ||||| || ||| ||| |||| | | | || |
Sbjct 17401 GAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGG---GTAAAGTAGCGCTCGGACA 17345
Query 214258 GGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACC 214317
||| |||| | || || ||| |||||||| |||||| | ||| |
Sbjct 17344 TGAGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACAC 17285
Query 214318 TCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGG 214374
||| ||||||||||| || | || || | ||| | | || |||| |||||
Sbjct 17284 GCATGAGCATGTGCTGCGGGCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAGG 17228
Query 214375 AGCGCTCCAGAGTCTTGAACCCAAAGTA 214402
||||||| || || ||||| ||||||||
Sbjct 17227 AGCGCTCGAGCGTTTTGAAGCCAAAGTA 17200
>seq92
Length=809976
Score = 105 bits (116), Expect = 1e-17
Identities = 164/234 (70%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513
|||||| || || || ||| ||| ||||| | |||||| || | ||||| |||||
Sbjct 384683 GATCTGAAAGCCATAAAAGCACCTCGCCTCGGCGAACTGCACCTCACTTGAGAACCTCTC 384624
Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573
| || |||||||| || | |||||||||||| || |||||||| || || || |
Sbjct 384623 AACCAAGTTCTCATTCACGACCCCATCTGAAGCGGCGAAGAAGGCGAGCACGTGGGCGAT 384564
Query 48574 GAAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630
|| | ||| |||| || | |||| | |||| | || | ||| |||| |||||
Sbjct 384563 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGCTGCCGAGGTC 384504
Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
| ||||| | | ||| |||||||| | |||| |||||||||| |||| ||
Sbjct 384503 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAAAT 384450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931530913646080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |