Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq54 136 7e-27 seq92 105 1e-17 >seq54 Length=1353381 Score = 136 bits (150), Expect = 7e-27 Identities = 775/1228 (63%), Gaps = 40/1228 (3%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | || |||| ||||||||| || || |||| | ||||| Sbjct 18404 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 18345 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || ||| |||||| || | |||| | || || || Sbjct 18344 AGCTTGCGCGCCTCGGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGA 18285 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || |||||||||||||| | ||| | | || || || | || ||| | Sbjct 18284 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAATTGGAGTTCTGCGC-CTCGATGAC 18226 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 || || | ||| ||||||||| ||| | |||| | | | || ||| ||| | Sbjct 18225 AGGATAGTAATTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 18166 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489 | || ||| | | || |||| | |||| || | || ||| |||| |||| Sbjct 18165 GTGCA---ACTTTTTA---AAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 18113 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549 | ||||| |||||| ||||| ||| | | | | |||||| ||||||||||||| Sbjct 18112 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGC 18053 Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609 ||| ||| | ||| || || ||||||| |||||||| || ||| || | | Sbjct 18052 ACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGT 17993 Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669 |||||||||||||| ||||| || || || | ||||| | | || || | ||| | Sbjct 17992 CCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAA 17933 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTACTGTTCGT 213726 | | || || | | || | ||| | | ||| |||| | ||| Sbjct 17932 GCTTTTGCGCGGGGATCGTTTTCTTGGCG----CGGCCCT--CCTTTTCGTATTTCTCGA 17879 Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783 | | || ||| || | ||| |||| || || || || || | ||||| | Sbjct 17878 ACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 17822 Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 | | ||| ||| || ||| | | ||| | || |||||| || || || | ||| | Sbjct 17821 AGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGA 17762 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 |||| ||| || || | | | || ||| || || ||||| || || | Sbjct 17761 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCA 17702 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960 | || ||||||| ||| |||||||||||||| | |||||| || ||||| || | || Sbjct 17701 GGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 17642 Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020 | ||||| || ||||| || | ||| ||||| ||| || || | ||| || | Sbjct 17641 TGTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGA 17582 Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080 ||||| || | ||||| || || || || || ||||||| || | | |||| | Sbjct 17581 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGA 17522 Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140 || | || || ||||||||| ||||||||| | ||||| | | | || || Sbjct 17521 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGT 17462 Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200 ||||| | || ||||| | | | | || ||| ||| ||| ||||| || Sbjct 17461 AAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGT 17402 Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTG---TTAGAGA 214257 | || || | |||||| ||||| || ||| ||| |||| | | | || | Sbjct 17401 GAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGG---GTAAAGTAGCGCTCGGACA 17345 Query 214258 GGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACC 214317 ||| |||| | || || ||| |||||||| |||||| | ||| | Sbjct 17344 TGAGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACAC 17285 Query 214318 TCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGG 214374 ||| ||||||||||| || | || || | ||| | | || |||| ||||| Sbjct 17284 GCATGAGCATGTGCTGCGGGCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAGG 17228 Query 214375 AGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 ||||||| || || ||||| |||||||| Sbjct 17227 AGCGCTCGAGCGTTTTGAAGCCAAAGTA 17200 >seq92 Length=809976 Score = 105 bits (116), Expect = 1e-17 Identities = 164/234 (70%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513 |||||| || || || ||| ||| ||||| | |||||| || | ||||| ||||| Sbjct 384683 GATCTGAAAGCCATAAAAGCACCTCGCCTCGGCGAACTGCACCTCACTTGAGAACCTCTC 384624 Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573 | || |||||||| || | |||||||||||| || |||||||| || || || | Sbjct 384623 AACCAAGTTCTCATTCACGACCCCATCTGAAGCGGCGAAGAAGGCGAGCACGTGGGCGAT 384564 Query 48574 GAAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630 || | ||| |||| || | |||| | |||| | || | ||| |||| ||||| Sbjct 384563 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGCTGCCGAGGTC 384504 Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 | ||||| | | ||| |||||||| | |||| |||||||||| |||| || Sbjct 384503 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAAAT 384450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530913646080