Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq95 87.8 1e-11
>seq95
Length=1340552
Score = 87.8 bits (96), Expect = 1e-11
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| || || || | | ||| || || ||||| ||||| || || |||||||||
Sbjct 532767 TTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGT 532826
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || ||||| || ||||||||||| ||||| ||||| ||||| || ||
Sbjct 532827 TGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCC 532886
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | || || || || || || || || || ||||| |||||||||||
Sbjct 532887 GAGGATTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAAATTTG 532942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268172251033976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |