Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq54 156 5e-33
seq71 125 9e-24
seq66 109 7e-19
seq92 86.0 7e-12
>seq54
Length=1353381
Score = 156 bits (172), Expect = 5e-33
Identities = 593/924 (64%), Gaps = 15/924 (2%)
Strand=Plus/Plus
Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||||||| ||||||| || ||| ||| | | || |||| |||| ||
Sbjct 17199 TTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAGGTCGC 17258
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| ||| ||| ||||| ||||||| ||||| ||||||||||||| | ||||||||
Sbjct 17259 CGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGA 17318
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAAC 75324
|||||| || | ||| || |||||| | | || | ||||| | || ||
Sbjct 17319 GCGCGTCTTGCAGTCTTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGAC 17378
Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384
|||||||| || || || || |||||| | || || ||||| || | | ||
Sbjct 17379 GCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAA 17438
Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444
||| || || || | || || || | || || | | ||| |||| ||||| |||
Sbjct 17439 GGATGATTCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGAC 17498
Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGG 75503
|| || ||||| || || |||||| | | | || | ||| || |||
Sbjct 17499 CGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGG--CTCCTACATCGCC 17556
Query 75504 GG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| || || || | || | || || | || ||||| || || | ||| ||| |||
Sbjct 17557 GGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGCG 17616
Query 75563 CGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAA 75616
||||| || | |||| || ||||| | || || ||||| ||||| | ||
Sbjct 17617 CGCTACGTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAG 17673
Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676
|| ||||| || || || | |||||||| || | || || || || | || ||
Sbjct 17674 CCGTGGCACGCTGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAGGAA 17733
Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736
| || | | |||||||| | | || |||||||| || || |||||| |||| ||
Sbjct 17734 GTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTC 17793
Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796
|||| | || | ||| |||| ||||| || | | | || || || ||| ||| |
Sbjct 17794 GAGGCCGCCGGCGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTC 17853
Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856
|| || ||||| ||| | | | || || ||| ||||||| | |||||
Sbjct 17854 TATGGCGAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAA 17913
Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915
|| | || || || | | ||||| | || |||||| | | ||| || ||||| |
Sbjct 17914 ACGATCCCCGC-GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAA 17972
Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975
|| | ||||| |||||||| || |||||||| ||||||||||| | || ||
Sbjct 17973 CCCCTTCATGCTCTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGAC 18032
Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035
|||||| || || | ||||| || || | |||||| | | ||| ||| ||
Sbjct 18033 GATCAAGTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAGTGCGC 18092
Query 76036 TGTTTGCAATTTGGCATCAATCGC 76059
|| ||||| ||||| || |||||
Sbjct 18093 CGTCTGCAACTTGGCCTCGATCGC 18116
>seq71
Length=189300
Score = 125 bits (138), Expect = 9e-24
Identities = 274/408 (67%), Gaps = 2/408 (0%)
Strand=Plus/Plus
Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618
||||| |||| | | |||| ||| ||||| |||||||||| ||| | || || | ||
Sbjct 139002 TCAACGAACTCCTTGACAGGGTGGGTCTCACCCGTCGCGAGGACAAAGTCGTCGGGCTTG 139061
Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678
||||| || | ||| |||||| | || || ||||| ||| || ||||| || |
Sbjct 139062 TCTTGCTGCATCATCCTCCACATACCCTCGACGTAGTCGGCGGCGTGTCCCCAATCACGC 139121
Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738
|| | | || ||||| | ||| | || | ||| | || | |||
Sbjct 139122 TTGGCCTCCATATTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 139181
Query 177739 CCATCAGTA-ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAA 177797
| || | | |||||| | ||||||||| | ||| || | ||| || |||||||||||
Sbjct 139182 GC-TCGGGAGATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAA 139240
Query 177798 GAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTG 177857
| ||| ||| ||| || ||||| || || | || ||||| || ||||| | ||||
Sbjct 139241 CAAGATACCGTTGCACGCGTACATGCCGTACGCCTCGCGGTAGTTCTTGACAATCCAGAA 139300
Query 177858 AGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTG 177917
||| ||| |||| ||| || || || || ||||| ||||| ||| ||| | |||
Sbjct 139301 GGCGTACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAAAAGGGCGTCGTCTCGGATTG 139360
Query 177918 TGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
|| || || ||| || || ||| ||| ||||| |||||||||||
Sbjct 139361 AGGGGTCTCGACGACCTTGCCGTACAACTCGGAAGTCGAGGCTTGGTA 139408
>seq66
Length=1115558
Score = 109 bits (120), Expect = 7e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807
||||| | ||||| ||| | || || | || || ||||||||||||||||| |||
Sbjct 287011 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 287070
Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867
||| || ||||| | || || || ||||| || ||||||| |||| ||| |||
Sbjct 287071 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 287130
Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927
|||| ||| ||||| || || ||||||||||| ||| ||| | || || || ||
Sbjct 287131 TTGGCGACTCCATAAGGCGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 287190
Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
||| || || ||| |||||| || ||||| |||||
Sbjct 287191 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 287228
>seq92
Length=809976
Score = 86.0 bits (94), Expect = 7e-12
Identities = 236/354 (67%), Gaps = 12/354 (3%)
Strand=Plus/Minus
Query 13547 ATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGA--A 13604
|| || ||| || |||| | || || |||||||| || |||||| | | | || |
Sbjct 127894 ATCACGGGTCTTGTCAAGCTCGAAGATGCGAACAACGCTGGTACG--AGGAACGGGTCCA 127837
Query 13605 AGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCT 13664
|||| || ||||| | || || || ||||| || || | ||||| || |||||||
Sbjct 127836 AGTGCACGCTCATCTTGACCGAAGGAGATTCCGCCAAGGCGCTCGCCGTCTCGGGTCTGG 127777
Query 13665 CTGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTC 13724
||||||| ||||| || |||| ||||| ||||| | || || || | || || |
Sbjct 127776 CTGTCGTCGGTCGAGACAACTATGGTGTCTTCCCTTTGCGAGGAAAGTTGCTCAACGTGC 127717
Query 13725 GGGACGCTTCGGTGGCACAGCTCACATCAAACCAG--GAG-TTCAA-CGATCTCAAGAAG 13780
| || || ||| ||| ||| | | || | | ||| ||||| ||||| ||| ||
Sbjct 127716 GTGAAGCGGCGG--GCAAAGCCCTCCTCGACAATGCCGAGATTCAAGCGATC--AAGCAG 127661
Query 13781 ATCCTTGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGT 13840
||| | ||||| || || || |||| ||| || || || || || ||
Sbjct 127660 ATCTTGGGTCTGCAGCAGGGCAAAGTTTACACCGACGTCGACTCGCTCCGTTACGGCAAG 127601
Query 13841 CTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894
|| ||||| ||| | ||| ||| | ||||| || || ||||||||||| |||
Sbjct 127600 CTCATGATCATGGCCGATCAAGATCACGATGGATCGCATATCAAGGGTCTGATC 127547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568391946560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |