Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq54 226 3e-53
seq66 102 1e-15
seq99 98.7 1e-14
seq95 96.9 4e-14
>seq54
Length=1353381
Score = 226 bits (250), Expect = 3e-53
Identities = 335/471 (71%), Gaps = 19/471 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
|||||||||||||||||||||| ||| |||| ||||||||||| |||| |||||| ||
Sbjct 17630 TGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 17571
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||| ||||| || | ||||| ||||| ||||| | ||||| | || |||
Sbjct 17570 TAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTCAAACCG 17511
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct 17510 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCTTCA 17451
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||| || ||||||| || || || || ||||| |||||||| | ||| |||
Sbjct 17450 ATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCG 17391
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGT-AGGT 1630364
|||||||||||||| |||| || ||| || | || |||||| || || ||
Sbjct 17390 GCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTAAGAC 17331
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|| || |||||| || | |||| | || | | ||||| ||||||
Sbjct 17330 TGCAAG-ACGCGC------------TCAATGTCGTGA---CCGTGGATGCCGACGGCGAC 17287
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCG-CGCACCTTGGTCAGGTAGG 1630483
||||||||||||| ||| || || ||| |||| |||| || | | || |||||
Sbjct 17286 ACGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAG-CAAGTAGG 17228
Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534
| || | || ||| ||||||||| || | |||||||||||||
Sbjct 17227 AGCGCTCGAGCGTTTTGAAGCCAAAGTAATTGTAGCCGAAATCGCGGTCGT 17177
Score = 125 bits (138), Expect = 9e-23
Identities = 286/439 (65%), Gaps = 0/439 (0%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221
||| || |||||||||||||| ||| | |||| | |||| || ||||||| ||||| |
Sbjct 18070 ACTCGATGATCTCGGTGCACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTG 18011
Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281
|| ||| |||||||||||| ||||||| |||| ||| || |||| ||| |||
Sbjct 18010 ATTTCTTGTTCGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCT 17951
Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNNN 1628341
||| || || |||| | || ||||||| | || ||||||||||
Sbjct 17950 CGAGAATTGCGTACCAAAGCTTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTT 17891
Query 1628342 NNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCT 1628401
|| | |||| ||| ||||| |||||||| || |
Sbjct 17890 CGTATTTCTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTT 17831
Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCAC 1628461
||| || || ||||| | ||| ||||| ||| | | | || ||| ||||| ||
Sbjct 17830 CGGCGGGGCAGAAGAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGG 17771
Query 1628462 ACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 1628521
|||| || || | ||||| || || || ||| |||||||||||||| |||||
Sbjct 17770 GAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGC 17711
Query 1628522 TGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 1628581
||||| || | || | | ||| |||||||||||||| |||||| || ||||| |
Sbjct 17710 GAAGGTCCAGGAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTC 17651
Query 1628582 CCTTGCGCTTGCCGCCGCC 1628600
| |||||| ||| ||
Sbjct 17650 CGGGACGCTTGTTGCCACC 17632
Score = 120 bits (132), Expect = 4e-21
Identities = 175/242 (72%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 1626982 TGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCG 1627041
||||||||||| |||| ||| || || |||||| | ||||||| |||||||| ||
Sbjct 19231 TGGTCGACGGTGAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATACCC 19172
Query 1627042 GTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCG 1627101
||||| || || || ||| ||||| |||||||||||||| || | ||||| |
Sbjct 19171 GTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGCCATCGTCGGG 19112
Query 1627102 -TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGC 1627160
||| | ||| | ||||||||| || |||||||| ||| | ||||||||||
Sbjct 19111 CTCGAC-AAGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCACCTCGATCGGCCGA 19053
Query 1627161 CATGTCGATGGTGACCCGGTTG-GGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219
|| ||||| | | | ||| | | |||||| ||||||||| ||||||||||||| |
Sbjct 19052 CAGATCGATAAT-AGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 18994
Query 1627220 CG 1627221
||
Sbjct 18993 CG 18992
>seq66
Length=1115558
Score = 102 bits (112), Expect = 1e-15
Identities = 126/172 (73%), Gaps = 3/172 (2%)
Strand=Plus/Minus
Query 869704 GAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGAC 869763
||| || || ||| ||||||| |||||||||||| |||||||||||| || |||||
Sbjct 115535 GAATCGCTCGACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGAC 115476
Query 869764 GTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGC 869820
|||| ||| |||| |||||||||| ||||| |||||| | ||||
Sbjct 115475 GTGCGAGATGAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTT 115416
Query 869821 GCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872
| | ||||| ||| ||||||||||| | || ||||||||||| ||||||
Sbjct 115415 GGACAAGTCCATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCCTTCTTGTAC 115364
>seq99
Length=1884034
Score = 98.7 bits (108), Expect = 1e-14
Identities = 145/203 (71%), Gaps = 7/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 1355785 GCTTGGACAGCTCTCCGGG-AGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 1355727
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||| | |||| || ||| || || || ||| || ||||||| || |
Sbjct 1355726 TGGTCGCCTTGTGGTTGT---AGGTCGCGAGCTTGCACGCTTCGATGGCGATGCGCTCAA 1355670
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || | ||||| |||||| || || || |||||
Sbjct 1355669 AGATGTCGTTGACGAACGAGTTGAGGATCAGCATCGCCTTGTTCGAAATACCGGTGTCGG 1355610
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| || ||||| | |||||||
Sbjct 1355609 GGTGGACTTGCTTCAACACCTTG 1355587
Score = 93.3 bits (102), Expect = 5e-13
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || ||| || | | ||||| ||| || | |||||||||||||||| ||
Sbjct 220828 GCTTGGACAATTCTCCAGGGAGGATCAAGCGAACCGAAGTCTGGATCTCGCGCGACGTGA 220769
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
|||| ||| | |||| | ||||| || | |||||| | |||||| || |
Sbjct 220768 TCGTCGCCTTGTGGTTGT---ATTGCGCGAGCTTGGACGCCTCGAGGGTGATGCGCTCAA 220712
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| ||| ||| |
Sbjct 220711 AGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAGATACCCGTGTCCG 220652
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| |||||| | | ||| |||
Sbjct 220651 GGTGAACCTGCCTCAACACTTTG 220629
>seq95
Length=1340552
Score = 96.9 bits (106), Expect = 4e-14
Identities = 102/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 1048285 ATCGGTGGTACGGTCACGTGCGTCATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCCGTG 1048344
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || || | ||||||||||||||||||||||| || ||||||||
Sbjct 1048345 -TTCGACAAGCTGGAAGCTCTTTTGGCCCACGCCATGCTGTCGATCCCCGCAACCAAGGG 1048403
Query 19172 ATTCGAGATTGG 19183
|| ||||||||
Sbjct 1048404 CTTTGAGATTGG 1048415
Score = 91.5 bits (100), Expect = 2e-12
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 1574008 TCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCG 1574067
|||||||||| ||||| ||||||| |||| || | | || || || || |
Sbjct 951138 TCGACGTCGTACGCAACCGCATCAAGGCTTTCGCCCAGAAAAAGGTCACACTCCCACCGG 951079
Query 1574068 GACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGG 1574127
| ||||||||| | ||||||||||||| ||||| | | || ||| |||||||| |
Sbjct 951078 GTCGCCACAAGCTCGTCATCCTCGACGAAGCCGATTCGATGACCCCGGGAGCCCAGCAAG 951019
Query 1574128 CCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACA 1574187
| || || || ||||||| | ||||||| || ||||| ||| | |||||||||
Sbjct 951018 CGCTCCGCAGGACGATGGAAATCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACC 950959
Query 1574188 CGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCAT 1574230
| | | |||||||| | | || ||||| ||||||||
Sbjct 950958 AGAGCAACAAGATCATCGAGCCGATTCAGAGTCGATGCGCCAT 950916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107125905521354
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |