Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq95 131 2e-25 seq78 123 2e-23 seq89 120 3e-22 >seq95 Length=1340552 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| ||||| || || || || || |||||||| || || | | Sbjct 533402 GATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTC 533343 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || || ||||| || ||||| || || || || || || | Sbjct 533342 GGACACGATTGACAACGTCAAGAC-CAAGATTCAGGACAAGGAGGGCATTCCCCCAGACC 533284 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 ||||||| |||||||| || || || ||||| |||||| | | | | ||||| | Sbjct 533283 AACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACA 533224 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || ||||| ||||| || |||||||||||||| | ||||| || Sbjct 533223 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGTCTCCGCGGTGG 533175 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || ||||| || || || || || |||||||| || ||| || | Sbjct 532945 ATGCAAATTTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAATCCTCG 532886 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || || |||||||||||| || || || || || || || Sbjct 532885 GACACGATTGACAACGTCAAGACCAA-GATCCAAGACAAGGAGGGCATTCCCCCAGACCA 532827 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | ||||| || || || ||||| |||||| | | | | ||||| || Sbjct 532826 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 532767 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || ||||||||| |||| Sbjct 532766 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 532731 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| || || || || || |||||||| || || | | Sbjct 533173 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 533114 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || || ||| || ||||| || || || || || || || Sbjct 533113 GACACGATTGACAACGTCAAGACCAA-GATTCAGGACAAGGAGGGCATTCCCCCAGACCA 533055 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| |||||||| || || || ||||| |||||| | | | | ||||| || Sbjct 533054 ACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 532995 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || |||||||||||||| | ||||| || Sbjct 532994 CATCCAGAAGGAGTCGACGCTTCACTTGGTGTTGCGTCTCCGCGGTGG 532947 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || |||||||| || || || | Sbjct 804705 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804646 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || |||||||| || || || || || ||| Sbjct 804645 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 804586 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || ||||| |||||| | | | | ||||| ||| Sbjct 804585 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 804526 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| ||||| || ||||||||| Sbjct 804525 ATTCAGAAGGAGTCGACGCTGCACTTGGTG 804496 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || |||||||| || || || | Sbjct 804477 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804418 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || |||||||| || || || || || ||| Sbjct 804417 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 804358 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || ||||| |||||| | | | | ||||| || Sbjct 804357 CAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTACAAT 804298 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || |||||||| ||||| || ||||||||| Sbjct 804297 ATCCAAAAGGAGTCGACGCTGCACTTGGTG 804268 >seq78 Length=594305 Score = 123 bits (136), Expect = 2e-23 Identities = 165/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| |||||| | || || || || || || || || || ||||| || || | ||| Sbjct 306074 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 306133 Query 24765 ACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || |||| || || || |||||||||||| ||||| || || || || || Sbjct 306134 ACACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 306192 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| ||||| || ||||| |||||| | | | || | || || ||| Sbjct 306193 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 306252 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| || ||||| || ||||||||| | || |||| || || Sbjct 306253 ATCCAAAAAGAGTCGACTCTCCACTTGGTGCTCCGCCTGCGTGGTGG 306299 >seq89 Length=998246 Score = 120 bits (132), Expect = 3e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| |||||| | || || || || || || || || || ||||| || || | |||| Sbjct 823731 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 823672 Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 ||| | || |||| || || || |||||||||||| ||||| || || || || || | Sbjct 823671 CACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 823613 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||||||||| || ||||| |||||| | | | || | || || |||| Sbjct 823612 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 823553 Query 24885 TTCAAAAGGAATCGACACTACACTTGGT 24912 | |||||||| || || || |||||||| Sbjct 823552 TCCAAAAGGAGTCCACCCTCCACTTGGT 823525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896688957360