Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq89 125 5e-24 seq78 123 2e-23 seq95 116 2e-21 >seq89 Length=998246 Score = 125 bits (138), Expect = 5e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| |||||| || ||||| ||||| | | | |||| |||| Sbjct 823522 AGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 823581 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 823582 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 823641 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 823642 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 823701 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 || ||||| || ||||| |||||||| ||| ||| Sbjct 823702 TTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGA 823735 >seq78 Length=594305 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || || ||||| ||||| | | | |||| |||| || || ||||| |||||||| Sbjct 306264 CTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 306205 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || |||||||||||| |||| | || |||||||| | || || |||||| Sbjct 306204 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTT 306145 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| || | ||| |||||||| |||||||||||||| || Sbjct 306144 GTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 306085 Query 34966 AAAGATCTGCA 34976 |||||| |||| Sbjct 306084 AAAGATTTGCA 306074 >seq95 Length=1340552 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || |||| || |||| |||| || || ||||| || ||||| Sbjct 533210 CTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 533269 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| |||||| |||||| | || | ||||||||||| | || || |||||| Sbjct 533270 GATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTT 533329 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| || | || |||||||| ||||| || ||||| || Sbjct 533330 GTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCCGTAAGCGTCTTAAC 533389 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 533390 GAAGATCTGCAT 533401 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || ||||||||| ||||| || |||| || |||| |||| || Sbjct 532965 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCG 533024 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || |||||||||| |||||| |||||| | || | ||||||||||| | Sbjct 533025 AGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 533084 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | |||| || | |||||| || | || || ||||| Sbjct 533085 ATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTG 533144 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||| || ||||| ||||| Sbjct 533145 CCCGTAAGCGTCTTGACGAAGATTTGCAT 533173 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || | || |||| |||| || || ||||| || ||||| Sbjct 804514 CTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 804573 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||| ||||| | || || |||||| Sbjct 804574 GATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTT 804633 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 804634 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 804693 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 804694 GAAGATCTGCAT 804705 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || | || |||| |||| || || ||||| || ||||| Sbjct 804742 CTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 804801 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||| ||||| | || || |||||| Sbjct 804802 GATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTT 804861 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 804862 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 804921 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 804922 GAAGATTTGCAT 804933 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||||||||| ||||| || |||| || |||| |||| Sbjct 532733 CAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATC 532792 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||| || ||||| |||||| | || | ||||||||||| Sbjct 532793 CTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 532852 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || || ||||| || | || || || Sbjct 532853 TTGGATCTTGGTCTTGACGTTGTCAATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGT 532912 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| || ||||| || || || ||||| Sbjct 532913 CTTGCCCGTAAGCGTCTTGACGAAAATTTGCAT 532945 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || || || || || | || |||| |||| || || ||||| || ||||| Sbjct 804286 CTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 804345 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||| ||||| | || || |||||| Sbjct 804346 GATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTT 804405 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 804406 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 804465 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 804466 GAAGATCTGCAT 804477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692156960278