Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq54 260 1e-64 seq78 136 4e-27 seq89 134 1e-26 seq95 129 6e-25 seq66 100 3e-16 >seq54 Length=1353381 Score = 260 bits (288), Expect = 1e-64 Identities = 831/1257 (66%), Gaps = 39/1257 (3%) Strand=Plus/Minus Query 148533 GCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTG 148592 |||| ||||| || ||||| |||| ||| ||| || |||||| || ||| ||||| Sbjct 18404 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 18345 Query 148593 AGCA-GCGCCGCCGACTCGCTT-TCGTACGGCATACGC--AGCCGCACAAACGCGTCGGC 148648 ||| |||| ||| | || ||| ||||||| ||| || | || ||||||||||| Sbjct 18344 AGCTTGCGC-GCCT-CGGGCGAATCGAACGGCAT-CGCCAAGGC-CATGAACGCGTCGGC 18289 Query 148649 AAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC 148708 || || || || || | ||| ||||| ||||| | |||||| |||| ||| Sbjct 18288 GAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAATTGGAGTTCTGCGC-CTCGA 18230 Query 148709 -GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTA 148766 || ||||||| ||| ||||||||| || |||| ||| | || ||||| Sbjct 18229 TGACAGGATAGTAATTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGACG 18171 Query 148767 ATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGCGA 148824 | | ||| | || ||| |||||| | | | |||| | |||| || |||| Sbjct 18170 ACCTCGTGCAACTTTTTAAAGTCGTACACGCCGTTCTTGATGAAGCTCGG--CAACGCGA 18113 Query 148825 TAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGC 148884 | ||||| | ||||| ||||| ||| ||||| || |||||| | |||||||| || Sbjct 18112 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGC 18053 Query 148885 ACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGT 148944 ||| || | |||||| || | ||||||||| || || |||| |||| Sbjct 18052 ACAAGTTCGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGT 17993 Query 148945 CCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGAT 149001 ||||||| |||||| | || ||||||||| ||||| | || | || | ||| | Sbjct 17992 CCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAA 17933 Query 149002 GCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACA 149061 || | |||||| | | | || | ||| ||||||| |||||| ||| Sbjct 17932 GC---TTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACA 17876 Query 149062 -GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CACAT 149119 | ||| |||| | ||||| ||| |||| ||| |||||| ||| ||||| || | Sbjct 17875 AGGCGCG-GAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCGGCGGGGCAGAA 17818 Query 149120 GAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC 149179 ||| | |||| ||||| | || | || |||| ||| || |||||||| | ||||||||| Sbjct 17817 GAGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 17758 Query 149180 GTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGC--CCATGTTGCG-GCGCAGGTTGAG 149236 | | ||| || || || || | |||| | || || | | ||| |||| || Sbjct 17757 AAAGAAGAGATCACGAGC---GCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAG 17701 Query 149237 CACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC-- 149294 | || | ||| |||||||||||||| | ||| | ||||| || || ||| Sbjct 17700 GAACTCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTT 17641 Query 149295 -TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353 ||||| || |||||||||| |||| || ||||||| | || || | ||| || | || Sbjct 17640 GTTGCCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGAT 17581 Query 149354 GCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCA 149412 ||| | | ||| |||||| || | ||| |||| || || | ||||| | Sbjct 17580 GCCGTTCG-AGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGA 17522 Query 149413 CGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAG 149471 | | | ||||| || ||| || ||| |||||| |||||| ||| |||||| | Sbjct 17521 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTGAGCGTGTCG 17463 Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531 || ||||| || || || |||||| || | ||| || || || | | ||||| Sbjct 17462 TAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGG 17403 Query 149532 AAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATC 149591 | |||| ||||| ||| | || || |||||| ||||| || || | ||| Sbjct 17402 TGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATG 17343 Query 149592 ATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 | | ||| |||| | ||||| || ||||| | || |||||||| | |||||| ||| Sbjct 17342 AGGTTGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGC 17283 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTT 149711 || ||||| |||||||| || || || || ||| | || ||||||||| | Sbjct 17282 ATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGC 17223 Query 149712 TCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 || || || ||| |||||||||| |||||| | || |||||| ||| | || |||| Sbjct 17222 TCGAGCGTTTTGAAGCCAAAGTAATTGTAGCCGAAATCGCGGTCGTAGATAACGGCG 17166 >seq78 Length=594305 Score = 136 bits (150), Expect = 4e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || |||||||| || || ||||| ||| ||| ||| | | | ||||||||||||||||| Sbjct 306269 GTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAGCTGCTTGCC 306211 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || |||||||| || ||||||||||||||||| |||||| ||| Sbjct 306210 GGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTT 306151 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | ||| || |||| ||||| ||| ||||| || || || Sbjct 306150 GACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGT 306091 Query 133643 TTTTACGAAAATCTGCA 133659 || || || || |||| Sbjct 306090 CTTGACAAAGATTTGCA 306074 >seq89 Length=998246 Score = 134 bits (148), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 823528 AAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 823586 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 823587 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 823646 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 823647 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 823706 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||| || Sbjct 823707 CGTAAGAGTCTTGACAAAGATTTGCCTG 823734 >seq95 Length=1340552 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 804509 GTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 804567 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| || ||||| ||||| ||| Sbjct 804568 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTT 804627 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 804628 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804687 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 804688 CTTGACGAAGATCTGCAT 804705 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 532749 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 532807 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| |||||||| |||||| ||| Sbjct 532808 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGTCTT 532867 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | || || || |||| |||| || ||||| || || || Sbjct 532868 GACGTTGTCAATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 532927 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 532928 CTTGACGAAAATTTGCAT 532945 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || |||||||||||| | | |||| | | | ||||| ||||||||||| Sbjct 804281 GTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCAAGCTGCTTGCC 804339 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| || ||||| ||||| ||| Sbjct 804340 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTT 804399 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 804400 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804459 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 804460 CTTGACGAAGATCTGCAT 804477 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 804737 GTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 804795 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| || ||||| ||||| ||| Sbjct 804796 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGAATCTTGGCCTT 804855 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 804856 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 804915 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 804916 CTTGACGAAGATTTGCAT 804933 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 533205 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 533263 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || || ||||| |||||||| ||||| ||| Sbjct 533264 AGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTT 533323 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | | ||| || |||| |||| ||| ||||| || || || Sbjct 533324 GACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCCGTAAGCGT 533383 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 533384 CTTAACGAAGATCTGCAT 533401 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 532977 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 533035 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || || ||||| |||||||| ||||| ||| Sbjct 533036 AGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTT 533095 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 533096 GACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 533155 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 533156 CTTGACGAAGATTTGCAT 533173 >seq66 Length=1115558 Score = 100 bits (110), Expect = 3e-16 Identities = 179/251 (71%), Gaps = 13/251 (5%) Strand=Plus/Minus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 116332 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 116274 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || ||||||||||| || || |||||||||| ||| ||| | | |||| |||| | Sbjct 116273 AATTCCTTCTCAATTTCGACGGCCTCCTTGATGATGAGCGCG-ACGGTGT---CGGG-GT 116219 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTAC---AGGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 || |||| | || | | || || || ||||| |||||||| ||||| |||||||| Sbjct 116218 GAGGTCTTCGCT-CGAGGT-GGGAGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 116161 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 116160 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATTAAGCCACGCTTCTTGAG 116101 Query 120729 GTAGAATATGG 120739 |||| |||| Sbjct 116100 CCAGAAGATGG 116090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419821072880