Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq95 116 3e-21 seq89 116 3e-21 seq78 105 6e-18 >seq95 Length=1340552 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | ||||||||| || | ||| |||||| || ||||||||||| || Sbjct 532947 CCACCGCGGAGACGCAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 533006 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | ||| Sbjct 533007 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGA 533066 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| ||||| ||| | |||| | | |||||| ||| || || Sbjct 533067 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGAC 533125 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||||||| || ||||| | || || || || || ||||| Sbjct 533126 CTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 533173 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | ||||||||| || | ||| |||||| || ||||||||||| || Sbjct 533175 CCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 533234 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | ||| Sbjct 533235 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGA 533294 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| ||||| ||| | |||| | | |||||| ||| || || Sbjct 533295 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGAC 533353 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||| || || ||||| | || || || || |||||||| Sbjct 533354 CTCGAGCGTGATGGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 533401 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| ||||||||||||||||| | || || | || || Sbjct 804496 CACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 804555 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | || || ||||| | |||| || ||| |||||| Sbjct 804556 GAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTG 804615 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| || || ||||| | ||||||||| | Sbjct 804616 AATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 804674 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || |||||||| Sbjct 804675 TGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804705 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | || |||||| || | ||| |||||| || ||||||||||| || Sbjct 532719 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 532778 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || || | || || ||||| | ||| Sbjct 532779 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 532838 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| |||||| ||| | |||| | | |||||| ||||| || Sbjct 532839 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGAGGATTCGAC 532897 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||||||| || ||||| | || || || || || ||||| Sbjct 532898 CTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAAATTTGCAT 532945 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| ||||||||| || ||||||||||| | || || | || || Sbjct 804268 CACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTC 804327 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | || || ||||| | |||| || ||| |||||| Sbjct 804328 AAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTG 804387 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| || || ||||| | ||||||||| | Sbjct 804388 AATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 804446 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || |||||||| Sbjct 804447 TGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804477 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| ||||||||||||||||| | || || | || || Sbjct 804724 CACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 804783 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | || || ||||| | |||| || ||| |||||| Sbjct 804784 GAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTG 804843 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| || || ||||| | ||||||||| | Sbjct 804844 AATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 804902 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 804903 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 804933 >seq89 Length=998246 Score = 116 bits (128), Expect = 3e-21 Identities = 142/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| ||||||||||| || | || || |||||||| || ||||| Sbjct 823542 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 823601 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | || | || |||||||| |||||| ||| | || Sbjct 823602 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGT 823660 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| ||| || ||||| | |||||||| || ||||| | ||| || | Sbjct 823661 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 823720 Query 35724 CAAATATCTGC 35734 |||| || ||| Sbjct 823721 CAAAGATTTGC 823731 >seq78 Length=594305 Score = 105 bits (116), Expect = 6e-18 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || ||| ||||| |||||||| |||||| Sbjct 306299 CCACCACGCAGGCGGAGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCC 306240 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || || |||||||| || || || || | || |||||||| | || Sbjct 306239 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 306180 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||| |||||| ||| | |||| | | ||||||| ||| || || Sbjct 306179 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGAC 306121 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 ||| | ||||| || || ||||| | || || ||||| || |||| Sbjct 306120 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 306074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792687142960