Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq78 111 1e-19 seq89 104 2e-17 seq95 93.3 4e-14 >seq78 Length=594305 Score = 111 bits (122), Expect = 1e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | || || |||||||| || ||||||||| | Sbjct 306299 CCACCACGCAGGCGGAGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCC 306240 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || |||||||| || |||||| | |||||||| || || || ||||| Sbjct 306239 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 306180 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| | || | | | || | ||||| | | || || Sbjct 306179 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 306120 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCA 27246 || || || || | |||||||| || || || ||||||||||||| Sbjct 306119 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 306074 >seq89 Length=998246 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || ||||| || ||||||||| || | |||| | || ||| Sbjct 823525 ACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 823584 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || ||||| | |||||||| || || || ||||| | || || || || | Sbjct 823585 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 823644 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | | || | ||||| | | || || || || || || | ||| Sbjct 823645 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 823704 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGC 27245 ||||| ||||| || |||||||||||| Sbjct 823705 CCCGTAAGAGTCTTGACAAAGATTTGC 823731 >seq95 Length=1340552 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||| || || || ||||| ||||| ||| | |||| | || ||| Sbjct 804725 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 804784 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | |||||||| ||||| || || || | |||||||| || Sbjct 804785 AGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGA 804844 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | ||||| | || || || || || || || | ||| Sbjct 804845 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 804904 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || || || ||||||||||| Sbjct 804905 CCGGTCAGGGTCTTGACGAAGATTTGCAT 804933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933561020144