Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq54 441 8e-119
seq66 95.1 1e-14
seq92 86.0 7e-12
>seq54
Length=1353381
Score = 441 bits (488), Expect = 8e-119
Identities = 782/1135 (69%), Gaps = 4/1135 (0%)
Strand=Plus/Plus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162
|| ||| || | ||||||| ||||| ||||||||||| || ||||| | ||| |||
Sbjct 17266 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGTC 17325
Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222
|| | ||| |||| ||| | || | ||| || ||||| ||||||| || |||
Sbjct 17326 TTGCAGTCTTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTC 17385
Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282
|||||||| ||| |||||||| | ||| ||||||||| || | |||||||||||
Sbjct 17386 AACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATGAT 17445
Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342
||||| ||||| ||||| ||||||||| |||||||| |||||||||| ||||
Sbjct 17446 TCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 17505
Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402
|||||||| | | | || ||||| | | || | ||| || ||||||
Sbjct 17506 GGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGGCTCCTACATCGCCGGCACGAAC 17565
Query 19403 GGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461
|| || ||| ||| |||||||| |||||||| |||| |||||||||||| | |||||
Sbjct 17566 GGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGCGCGCTACGT 17624
Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521
| |||| || ||| ||| || || | ||||| |||||||||||||| ||||||||
Sbjct 17625 CGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGC 17684
Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581
|||||| | || ||||| || || ||| ||| || || | ||||| | ||| |||
Sbjct 17685 TGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAGGAAGTCCGCGCTCG 17744
Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641
|| |||||| || | |||||||| || || ||||||||| || ||| | ||
Sbjct 17745 TGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGG 17804
Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701
|| |||| || | ||||| |||| ||| ||||| | ||| ||||| ||||| |
Sbjct 17805 CGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGA 17864
Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761
|||| | |||| | || |||| | ||||||| |||||| | ||| ||
Sbjct 17865 GTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGATCCCCGC 17924
Query 19762 CCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTG 19821
| | | ||| || | ||| | ||||||||| || |||| || | ||||
Sbjct 17925 GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTTCATGCT 17984
Query 19822 CTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTC 19881
||||||||||||||||||| || ||||| || |||||| | || |||||||||||||
Sbjct 17985 CTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGACGATCAAGTCGTC 18044
Query 19882 CAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCT 19941
||| |||| || || ||||| ||| || ||||||||| ||||| || || |
Sbjct 18045 GAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAGTGCGCCGTCTGCAACTT 18104
Query 19942 GGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTA 20001
||| || | |||||| ||| ||||| | | | ||||||| || ||| |
Sbjct 18105 GGCCTCGATCGCGTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTTAAAAAGTTGCA 18164
Query 20002 CGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC 20061
|||||| | ||||||| | || |||| ||| ||||||| || | || ||
Sbjct 18165 CGAGGTCGTCAAGGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAATTACTATCC 18224
Query 20062 GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGG 20121
| | ||||| || || ||| | |||||||| || |||| ||||| || || ||
Sbjct 18225 TGTCATCGAGGCGCAGAACTCCAATTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGG 18284
Query 20122 CCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAGC 20180
|| ||||||| |||||| || ||| | | ||||| ||| |||||||| |||
Sbjct 18285 TCTCGCCGACGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGCAAGC 18343
Query 20181 TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235
|||||||| ||||||||| || | |||||||| || || | ||||||||
Sbjct 18344 TCAACAAGCAGATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 18398
Score = 430 bits (476), Expect = 1e-115
Identities = 790/1148 (69%), Gaps = 15/1148 (1%)
Strand=Plus/Minus
Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834
||||||| | || |||||||| | | ||||||||| ||||||||||| |||||||
Sbjct 18389 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCC 18333
Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893
| || | ||||||| | ||| || |||||| | ||||| || || || || ||
Sbjct 18332 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCC 18274
Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950
||| |||| || |||||||| | ||| || | ||||||| | || || |
Sbjct 18273 GATGCCGATGGGGCGGTGGCGGAAATTGGAGTTCTG---CGCCTCGATGACAGGATAGTA 18217
Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010
|| ||||||| |||||||| ||| | ||||||| ||||||| ||| ||
Sbjct 18216 ATTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTT 18157
Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069
|| || | | | | ||| |||||| |||| | | ||| |||| |||||
Sbjct 18156 TTTAAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 18098
Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129
| ||||| ||||||||| || ||||||||| || |||||||| || |||||||
Sbjct 18097 AGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGCACAAGTTCGACGACT 18038
Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189
|||| || || | |||||| ||||| |||| ||| ||||||||||||| ||||
Sbjct 18037 TGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGTCCTTGTAGAGCATGA 17978
Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249
| || | || || || ||||| || ||||| ||| ||| | | | || |||
Sbjct 17977 AGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGCGCGGGGA 17918
Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309
|||||| || |||| |||| || | |||| || ||| | || |
Sbjct 17917 TCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAACTCTTCGC 17858
Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369
||||||| ||| | ||||| ||| ||| ||||| | || |||| || || |
Sbjct 17857 CATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCACTCGCCGGCGG 17798
Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429
||| || |||||||||||| || || ||||| || || |||||| || || |
Sbjct 17797 CCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGC 17738
Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489
| | ||||| | ||| || ||| || || || || || || | || ||| |||||||
Sbjct 17737 GGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAACTCAAAGACGTCAGCGTGCC 17678
Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549
||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| |
Sbjct 17677 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 17618
Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609
| |||||||||||| | || ||||||||||| |||||||||| | | ||||||||| |
Sbjct 17617 GCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGC 17558
Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669
|| ||| | ||| | || || ||||| | | | ||||| || ||||
Sbjct 17557 CGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 17498
Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729
|||||||||| |||||||| ||||||||| ||||| ||||| || ||||| || ||||
Sbjct 17497 TCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 17438
Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789
|||| | ||||||||| ||| ||| | ||| |||| ||| |||||||||||||| |
Sbjct 17437 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 17378
Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849
|||||| ||||| || ||| | | | ||| || | ||| | || | |||||||
Sbjct 17377 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTAAGACTGCAAGACGCGCT 17318
Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908
| ||||| |||||||||||||| ||||| ||||||| | || ||| |||||| |||
Sbjct 17317 CAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCGT-TCG 17259
Query 79909 CCGACATT 79916
|||| ||
Sbjct 17258 GCGACCTT 17251
Score = 149 bits (164), Expect = 7e-31
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242
|||||| || ||||| |||||||| |||||||| || || |||||| ||||| | |||
Sbjct 19199 GGCGCGCGTGCGCAAGTAGTACATACCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 19140
Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302
||| || |||| |||| ||||| || || | |||||||||||| || |||||
Sbjct 19139 CATCGACGTGAGCTGCGCCATCGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 19080
Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362
||||||| | ||||| || ||||||| || ||||| | | |||||||| | ||||||
Sbjct 19079 GTCGATGAAGGCACCTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCA 19020
Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389
|| |||| ||| |||||||| || ||
Sbjct 19019 GACGGTCTTGTAGATGGCCTTGAGATC 18993
Score = 129 bits (142), Expect = 6e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677
||||||| ||| |||| |||||| ||||| || | || |||| || ||||| || ||
Sbjct 18996 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCG 19055
Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737
|||||||| || |||| |||||||||||| || |||||||| || | || || |||
Sbjct 19056 GCCGATCGAGGTGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCCG 19115
Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797
| ||||| |||| | || ||||| | ||||||||| | || || ||||||||
Sbjct 19116 ACGATGGCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGT 19175
Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821
|||||||| |||| || || |||
Sbjct 19176 ATGTACTACTTGCGCACGCGCGCC 19199
>seq66
Length=1115558
Score = 95.1 bits (104), Expect = 1e-14
Identities = 78/95 (82%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083
||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| |||
Sbjct 116077 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTAATGCCCGGATTGACCTTC 116136
Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118
||||||||||| || || || ||||||||||||||
Sbjct 116137 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 116171
>seq92
Length=809976
Score = 86.0 bits (94), Expect = 7e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079
||| ||||| ||| | || || ||||||||||| || ||||||||||| |||||
Sbjct 385135 CTCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTC 385194
Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119
||||||||||||||| || ||||| ||||| || || |||
Sbjct 385195 TTTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 385234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548523689237280
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