Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq54 441 8e-119 seq66 95.1 1e-14 seq92 86.0 7e-12 >seq54 Length=1353381 Score = 441 bits (488), Expect = 8e-119 Identities = 782/1135 (69%), Gaps = 4/1135 (0%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||||| ||||||||||| || ||||| | ||| ||| Sbjct 17266 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGTC 17325 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 || | ||| |||| ||| | || | ||| || ||||| ||||||| || ||| Sbjct 17326 TTGCAGTCTTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTC 17385 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 |||||||| ||| |||||||| | ||| ||||||||| || | ||||||||||| Sbjct 17386 AACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATGAT 17445 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||| ||||| ||||| ||||||||| |||||||| |||||||||| |||| Sbjct 17446 TCGATTGAAGGCATTTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 17505 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 |||||||| | | | || ||||| | | || | ||| || |||||| Sbjct 17506 GGTATCGGTTTGAGCATCCACAACATCCGCGCAACCGGCTCCTACATCGCCGGCACGAAC 17565 Query 19403 GGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || ||| ||| |||||||| |||||||| |||| |||||||||||| | ||||| Sbjct 17566 GGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACGGCGCGCTACGT 17624 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | |||| || ||| ||| || || | ||||| |||||||||||||| |||||||| Sbjct 17625 CGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGC 17684 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||||| | || ||||| || || ||| ||| || || | ||||| | ||| ||| Sbjct 17685 TGACGTCTTTGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAGGAAGTCCGCGCTCG 17744 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || |||||| || | |||||||| || || ||||||||| || ||| | || Sbjct 17745 TGATCTCTTCTTTGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGG 17804 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || |||| || | ||||| |||| ||| ||||| | ||| ||||| ||||| | Sbjct 17805 CGAGTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGA 17864 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761 |||| | |||| | || |||| | ||||||| |||||| | ||| || Sbjct 17865 GTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGATCCCCGC 17924 Query 19762 CCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTG 19821 | | | ||| || | ||| | ||||||||| || |||| || | |||| Sbjct 17925 GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTTCATGCT 17984 Query 19822 CTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTC 19881 ||||||||||||||||||| || ||||| || |||||| | || ||||||||||||| Sbjct 17985 CTACAAGGACGCCGCGAACAAGAAATCAAACCAAAAGAACCTTGGGACGATCAAGTCGTC 18044 Query 19882 CAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCT 19941 ||| |||| || || ||||| ||| || ||||||||| ||||| || || | Sbjct 18045 GAACTTGTGCACCGAGATCATCGAGTACTCGGCACCGGACGAGTGCGCCGTCTGCAACTT 18104 Query 19942 GGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTA 20001 ||| || | |||||| ||| ||||| | | | ||||||| || ||| | Sbjct 18105 GGCCTCGATCGCGTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTTAAAAAGTTGCA 18164 Query 20002 CGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC 20061 |||||| | ||||||| | || |||| ||| ||||||| || | || || Sbjct 18165 CGAGGTCGTCAAGGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAATTACTATCC 18224 Query 20062 GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGG 20121 | | ||||| || || ||| | |||||||| || |||| ||||| || || || Sbjct 18225 TGTCATCGAGGCGCAGAACTCCAATTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGG 18284 Query 20122 CCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAGC 20180 || ||||||| |||||| || ||| | | ||||| ||| |||||||| ||| Sbjct 18285 TCTCGCCGACGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGCAAGC 18343 Query 20181 TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 |||||||| ||||||||| || | |||||||| || || | |||||||| Sbjct 18344 TCAACAAGCAGATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 18398 Score = 430 bits (476), Expect = 1e-115 Identities = 790/1148 (69%), Gaps = 15/1148 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 18389 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCC 18333 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 18332 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCC 18274 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950 ||| |||| || |||||||| | ||| || | ||||||| | || || | Sbjct 18273 GATGCCGATGGGGCGGTGGCGGAAATTGGAGTTCTG---CGCCTCGATGACAGGATAGTA 18217 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 || ||||||| |||||||| ||| | ||||||| ||||||| ||| || Sbjct 18216 ATTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTT 18157 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 || || | | | | ||| |||||| |||| | | ||| |||| ||||| Sbjct 18156 TTTAAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 18098 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || ||||||||| || |||||||| || ||||||| Sbjct 18097 AGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGCACAAGTTCGACGACT 18038 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| || || | |||||| ||||| |||| ||| ||||||||||||| |||| Sbjct 18037 TGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGTTCGCGGCGTCCTTGTAGAGCATGA 17978 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | || || || ||||| || ||||| ||| ||| | | | || ||| Sbjct 17977 AGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGCGCGGGGA 17918 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 |||||| || |||| |||| || | |||| || ||| | || | Sbjct 17917 TCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAACTCTTCGC 17858 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | ||||| ||| ||| ||||| | || |||| || || | Sbjct 17857 CATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCACTCGCCGGCGG 17798 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || |||||||||||| || || ||||| || || |||||| || || | Sbjct 17797 CCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGC 17738 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| || ||| || || || || || || | || ||| ||||||| Sbjct 17737 GGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAACTCAAAGACGTCAGCGTGCC 17678 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 17677 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 17618 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | |||||||||||| | || ||||||||||| |||||||||| | | ||||||||| | Sbjct 17617 GCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGC 17558 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || ||| | ||| | || || ||||| | | | ||||| || |||| Sbjct 17557 CGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 17498 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||||||||| ||||| ||||| || ||||| || |||| Sbjct 17497 TCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 17438 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||||||| ||| ||| | ||| |||| ||| |||||||||||||| | Sbjct 17437 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 17378 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| || ||| | | | ||| || | ||| | || | ||||||| Sbjct 17377 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTAAGACTGCAAGACGCGCT 17318 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908 | ||||| |||||||||||||| ||||| ||||||| | || ||| |||||| ||| Sbjct 17317 CAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCGT-TCG 17259 Query 79909 CCGACATT 79916 |||| || Sbjct 17258 GCGACCTT 17251 Score = 149 bits (164), Expect = 7e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| |||||||| |||||||| || || |||||| ||||| | ||| Sbjct 19199 GGCGCGCGTGCGCAAGTAGTACATACCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 19140 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| ||||| || || | |||||||||||| || ||||| Sbjct 19139 CATCGACGTGAGCTGCGCCATCGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 19080 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||||||| | ||||| || ||||||| || ||||| | | |||||||| | |||||| Sbjct 19079 GTCGATGAAGGCACCTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCA 19020 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 19019 GACGGTCTTGTAGATGGCCTTGAGATC 18993 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| || ||||| || || Sbjct 18996 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCG 19055 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 |||||||| || |||| |||||||||||| || |||||||| || | || || ||| Sbjct 19056 GCCGATCGAGGTGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCCG 19115 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| |||| | || ||||| | ||||||||| | || || |||||||| Sbjct 19116 ACGATGGCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGT 19175 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 19176 ATGTACTACTTGCGCACGCGCGCC 19199 >seq66 Length=1115558 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 116077 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTAATGCCCGGATTGACCTTC 116136 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 116137 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 116171 >seq92 Length=809976 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079 ||| ||||| ||| | || || ||||||||||| || ||||||||||| ||||| Sbjct 385135 CTCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTC 385194 Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 ||||||||||||||| || ||||| ||||| || || ||| Sbjct 385195 TTTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 385234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523689237280