Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq95 122 8e-23 seq89 120 3e-22 >seq95 Length=1340552 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || | || Sbjct 804705 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804646 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| |||||||| ||||| || || || ||| Sbjct 804645 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 804586 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| ||||| || | || || | || | ||||||||||| Sbjct 804585 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 804526 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || ||||| | ||| | || ||||| || Sbjct 804525 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGGTAT 804476 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || || || || || || |||| Sbjct 533401 ATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTCG 533342 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || ||||| ||||| || ||||| || || || ||| Sbjct 533341 GACACGATTGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 533282 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || || | || | | ||||||||| Sbjct 533281 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 533222 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || ||||| |||||| | || ||||| || Sbjct 533221 ATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGTCTCCGCGGTGGTAT 533172 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||||||||||| | || || || || || || | || Sbjct 804933 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804874 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| |||||||| ||||| || || || ||| Sbjct 804873 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 804814 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| ||||| || | || || | || | ||||||||||| Sbjct 804813 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 804754 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || ||||| | ||| | || ||||| || Sbjct 804753 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGGTAT 804704 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || || || || || || |||| Sbjct 533173 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 533114 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || ||||| ||||| || ||||| || || || ||| Sbjct 533113 GACACGATTGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 533054 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || || | || | | ||||||||| Sbjct 533053 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 532994 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || ||||| |||||| | || ||||| || Sbjct 532993 ATCCAGAAGGAGTCGACGCTTCACTTGGTGTTGCGTCTCCGCGGTGGTAT 532944 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || | || Sbjct 804477 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 804418 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| |||||||| ||||| || || || ||| Sbjct 804417 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAA 804358 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| ||||| || | || || | || | |||||||||| Sbjct 804357 CAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTACAAT 804298 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||||||||| | || ||||| | ||| | || || || Sbjct 804297 ATCCAAAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGG 804251 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || || || || || ||| | || Sbjct 532945 ATGCAAATTTTCGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAATCCTCG 532886 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || || |||||||| || ||||| || || || ||| Sbjct 532885 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 532826 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| ||||| || | || || | || | | ||||||||| Sbjct 532825 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 532766 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || ||||| ||||| | || || || Sbjct 532765 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGGGG 532719 >seq89 Length=998246 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 || ||| || ||||| || ||||| || |||||| | || || || || || || |||| Sbjct 823734 CAGGCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 823675 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| || | ||||| || || |||||||| |||||||| || || || || Sbjct 823674 CGACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCA 823615 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| | || | |||||||| || | || || | ||| | |||| ||||| Sbjct 823614 GCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAA 823555 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||||||||| ||| | || ||||| | || | || |||||||| Sbjct 823554 CATCCAAAAGGAGTCCACCCTCCACTTGGTCCTCCGCCTCCGAGGTGGCAT 823504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917519290240