Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq95 176 1e-38
seq78 174 4e-38
seq89 172 1e-37
>seq95
Length=1340552
Score = 176 bits (194), Expect = 1e-38
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || |||||||| |||||||| || || | |||||
Sbjct 532734 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCC 532793
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || ||||||||||| || |||| || ||||||||
Sbjct 532794 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 532853
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || ||||| ||| ||| |||||||| |||||||||
Sbjct 532854 TGGATCTTGGTCTTGACGTTGTCAATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGTC 532913
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | |||||
Sbjct 532914 TTGCCCGTAAGCGTCTTGACGAAAATTTGCAT 532945
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| |||||||| || ||||| || || || | |||||
Sbjct 804266 AGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCGGCCATCC 804325
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || ||||||||||| || |||| || || ||||||
Sbjct 804326 TCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCC 804385
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||| ||||| ||| || |||||||| |||||||||
Sbjct 804386 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 804445
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 804446 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804477
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| || ||||| || |||||||| |||||||| || || | ||||| || |||||
Sbjct 532970 GTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTG 533029
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|||||| |||||||| | ||||||||||| || |||| || ||||||||||| |||||
Sbjct 533030 CTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 533089
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || ||||| || || |||||||| ||||||||||| |||||
Sbjct 533090 GGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGT 533149
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || | |||||
Sbjct 533150 AAGCGTCTTGACGAAGATTTGCAT 533173
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| || || ||||| || |||||||| |||||||| || || | ||||| || |||||
Sbjct 533198 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTG 533257
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|||||| |||||||| | ||||||||||| || |||| || ||||||||||| |||||
Sbjct 533258 CTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 533317
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || ||||| || || |||||||| ||||| ||||| |||||
Sbjct 533318 GGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCCGT 533377
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || | ||||||
Sbjct 533378 AAGCGTCTTAACGAAGATCTGCAT 533401
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || || ||||| ||||| || || || | |||||
Sbjct 804494 AGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCC 804553
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || ||||||||||| || |||| || || ||||||
Sbjct 804554 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCC 804613
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||| ||||| ||| || |||||||| |||||||||
Sbjct 804614 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 804673
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 804674 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804705
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || || ||||| ||||| || || || | |||||
Sbjct 804722 AGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCATCC 804781
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || ||||||||||| || |||| || || ||||||
Sbjct 804782 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCTTTGTCC 804841
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||| ||||| ||| || |||||||| |||||||||
Sbjct 804842 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 804901
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | |||||
Sbjct 804902 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 804933
>seq78
Length=594305
Score = 174 bits (192), Expect = 4e-38
Identities = 165/211 (78%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| ||||| ||||||||||||||||| || || || | ||| | |||||
Sbjct 306284 AGCACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 306225
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || ||||| ||||| || || | |||||||||||
Sbjct 306224 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 306165
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| ||||| || || |||||||| ||||| |||
Sbjct 306164 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 306105
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113
|| |||||||| ||||| ||||| | ||||
Sbjct 306104 TTGCCCGTGAGGGTCTTGACAAAGATTTGCA 306074
>seq89
Length=998246
Score = 172 bits (190), Expect = 1e-37
Identities = 160/203 (79%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || |||||||| ||||||||||| || || || | ||| | |||||
Sbjct 823522 AGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 823581
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| || ||||| ||||| || || | |||||||||||
Sbjct 823582 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 823641
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| ||||| || || |||||||| |||||||||
Sbjct 823642 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 823701
Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| |||||||| |||||
Sbjct 823702 TTGCCCGTAAGAGTCTTGACAAA 823724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149594035130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |