Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq78 127 5e-24 seq89 116 9e-21 seq95 89.7 1e-12 >seq78 Length=594305 Score = 127 bits (140), Expect = 5e-24 Identities = 153/207 (74%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| |||||||||||||||||||| ||||| || || | ||||| || | Sbjct 306279 CAAG-TGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGA 306221 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| || | |||||||| | || ||| |||||||| ||||| | Sbjct 306220 GCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGA 306161 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 306160 TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGC 306101 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||||||| ||||| || |||| |||| Sbjct 306100 CCGTGAGGGTCTTGACAAAGATTTGCA 306074 >seq89 Length=998246 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || ||||| |||||||||||||| ||||| || || | Sbjct 823515 GAGGCGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCG 823574 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||| ||||| || | |||||||| | || ||| ||||| Sbjct 823575 GCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTC 823634 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| || ||| || || || || Sbjct 823635 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGT 823694 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 || || |||||||| |||||||| || |||| Sbjct 823695 GATCGTCTTGCCCGTAAGAGTCTTGACAAAGA 823726 >seq95 Length=1340552 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| |||||||| ||||||||||| | || | Sbjct 804259 GAGACGGAGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCG 804318 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | || ||||| | | || || || Sbjct 804319 GCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 804378 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || ||||| || ||||| | || | |||| || ||| || || || || Sbjct 804379 TTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGT 804438 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| |||||| Sbjct 804439 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804477 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| || | || | ||||| || | Sbjct 532967 CAAG-TGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGA 533025 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| | | || ||||| | | || || ||||| || |||| Sbjct 533026 GCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAA 533085 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 533086 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGC 533145 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| ||||||| ||||| Sbjct 533146 CCGTAAGCGTCTTGACGAAGATTTGCAT 533173 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || |||||||||||||| || | || | ||||| || | Sbjct 533195 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGA 533253 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| | | || ||||| | | || || ||||| || |||| Sbjct 533254 GCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAA 533313 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 533314 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATGGTCTTGC 533373 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| ||||||| |||||| Sbjct 533374 CCGTAAGCGTCTTAACGAAGATCTGCAT 533401 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || || |||||||||||||| | || | Sbjct 804487 GAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCG 804546 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | || ||||| | | || || || Sbjct 804547 GCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 804606 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || ||||| || ||||| | || | |||| || ||| || || || || Sbjct 804607 TTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGT 804666 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| |||||| Sbjct 804667 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818405100702