Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq78 127 5e-24
seq89 116 9e-21
seq95 89.7 1e-12
>seq78
Length=594305
Score = 127 bits (140), Expect = 5e-24
Identities = 153/207 (74%), Gaps = 1/207 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| |||||||||||||||||||| ||||| || || | ||||| || |
Sbjct 306279 CAAG-TGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGA 306221
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| || | |||||||| | || ||| |||||||| ||||| |
Sbjct 306220 GCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGA 306161
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | |||| || ||| || || || || || || ||||
Sbjct 306160 TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGC 306101
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCA 152103
||||||| ||||| || |||| ||||
Sbjct 306100 CCGTGAGGGTCTTGACAAAGATTTGCA 306074
>seq89
Length=998246
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || || ||||| |||||||||||||| ||||| || || |
Sbjct 823515 GAGGCGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCG 823574
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||| ||||| || | |||||||| | || ||| |||||
Sbjct 823575 GCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTC 823634
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || ||||| | || | |||| || ||| || || || ||
Sbjct 823635 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGT 823694
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097
|| || |||||||| |||||||| || ||||
Sbjct 823695 GATCGTCTTGCCCGTAAGAGTCTTGACAAAGA 823726
>seq95
Length=1340552
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || || || ||||| |||||||| ||||||||||| | || |
Sbjct 804259 GAGACGGAGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGCGAGCGTGCG 804318
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || |||||||| || | || ||||| | | || || ||
Sbjct 804319 GCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 804378
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
|| || ||||| || ||||| | || | |||| || ||| || || || ||
Sbjct 804379 TTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGT 804438
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || ||||| ||||||| ||||||
Sbjct 804439 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804477
Score = 87.8 bits (96), Expect = 4e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||||| || |||||||||||||| || | || | ||||| || |
Sbjct 532967 CAAG-TGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGA 533025
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || |||||||| | | || ||||| | | || || ||||| || ||||
Sbjct 533026 GCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAA 533085
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | |||| || ||| || || || || || || ||||
Sbjct 533086 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGC 533145
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || ||||| ||||||| |||||
Sbjct 533146 CCGTAAGCGTCTTGACGAAGATTTGCAT 533173
Score = 87.8 bits (96), Expect = 4e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || |||||||||||||| || | || | ||||| || |
Sbjct 533195 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGA 533253
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || |||||||| | | || ||||| | | || || ||||| || ||||
Sbjct 533254 GCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAA 533313
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | |||| || ||| || || || || || || ||||
Sbjct 533314 TCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATGGTCTTGC 533373
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || ||||| ||||||| ||||||
Sbjct 533374 CCGTAAGCGTCTTAACGAAGATCTGCAT 533401
Score = 84.2 bits (92), Expect = 5e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || || || ||||| || || |||||||||||||| | || |
Sbjct 804487 GAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCG 804546
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || |||||||| || | || ||||| | | || || ||
Sbjct 804547 GCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 804606
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
|| || ||||| || ||||| | || | |||| || ||| || || || ||
Sbjct 804607 TTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGT 804666
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || ||||| ||||||| ||||||
Sbjct 804667 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818405100702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |