Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq95 143 2e-29 seq89 129 4e-25 seq78 120 2e-22 >seq95 Length=1340552 Score = 143 bits (158), Expect = 2e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | || | |||||||| ||||||||| |||||| ||||||||||| Sbjct 532940 TTGCATACCACCGCGGAGACGCAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTA 532999 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| ||||| ||| | || || |||||||| || || |||||||| || || || || Sbjct 533000 ATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTC 533059 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | || ||||| ||| ||||| ||| | | | || ||||| | || Sbjct 533060 TGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGA 533119 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | ||| |||||||| ||||| || ||||| |||||||||||||| Sbjct 533120 CTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 533173 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 ||||| | || | || ||||| ||| ||||| |||||| |||||||||||||| ||| Sbjct 532719 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 532778 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| || || ||||| | ||| || || |||| || Sbjct 532779 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 532838 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| || ||||| ||| | | | || ||||| | |||||| ||| Sbjct 532839 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCCGAGGATTCGACC 532898 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct 532899 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAAATTTGCAT 532945 Score = 129 bits (142), Expect = 4e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | || | |||||||| ||| ||||| |||||| ||||||||||| Sbjct 533168 TTGCATACCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTA 533227 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| ||||| ||| | || || |||||||| || || |||||||| || || || || Sbjct 533228 ATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTC 533287 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | || ||||| ||| ||||| ||| | | | || ||||| | || Sbjct 533288 TGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGA 533347 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | ||| || ||||| ||||| || ||||| |||||||| ||||| Sbjct 533348 CTCGACCTCGAGCGTGATGGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 533401 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || | | ||||| ||| ||||| |||||| || ||||||||||| Sbjct 804703 CATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATC 804762 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 |||||| ||| | || || |||||||| || || ||||| | ||| || || |||| Sbjct 804763 GGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGG 804822 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || ||| ||||| ||| | | | || ||||| | ||| || Sbjct 804823 GGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTC 804882 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||| |||||||| || || |||||||| |||||||||||||| Sbjct 804883 GACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 804933 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| |||| || | | ||||| ||| ||||| |||||||||||| ||||||||||| Sbjct 804250 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTTTGGATATTGTAATCGGC 804309 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| ||| | || || |||||||| || || ||||| | ||| || || |||| || Sbjct 804310 GAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGG 804369 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | || || || ||| ||||| ||| | | | || ||||| | ||| || || Sbjct 804370 AATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 804429 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| | ||| |||||||| || || |||||||| |||||||| ||||| Sbjct 804430 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804477 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || | | ||||| ||| ||||| |||||| || ||||||||||| Sbjct 804475 CATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATC 804534 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 |||||| ||| | || || |||||||| || || ||||| | ||| || || |||| Sbjct 804535 GGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGG 804594 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || ||| ||||| ||| | | | || ||||| | ||| || Sbjct 804595 GGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTC 804654 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||| |||||||| || || |||||||| |||||||| ||||| Sbjct 804655 GACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 804705 >seq89 Length=998246 Score = 129 bits (142), Expect = 4e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||||||||||||||| ||||| | ||| | || || Sbjct 823525 ACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 823584 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | ||| ||||| |||| || | |||||||| || Sbjct 823585 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 823644 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||||| || || ||||| | || |||||||| Sbjct 823645 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 823704 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 ||||| || ||||| || ||||||||| ||| Sbjct 823705 CCCGTAAGAGTCTTGACAAAGATTTGCCTGA 823735 >seq78 Length=594305 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || ||| |||||||||||||| ||||| | ||| | || || Sbjct 306282 CACCAAGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTC 306223 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | ||| ||||| |||| || | |||||||| || Sbjct 306222 GAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTG 306163 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || ||||||| || || ||||| | || || ||||| Sbjct 306162 GATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTT 306103 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 |||||||||||||| || |||||||||| Sbjct 306102 GCCCGTGAGGGTCTTGACAAAGATTTGCA 306074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989689243954