Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq24 95.1 3e-14
>seq24
Length=1725410
Score = 95.1 bits (104), Expect = 3e-14
Identities = 292/442 (66%), Gaps = 16/442 (4%)
Strand=Plus/Minus
Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798
||||||||||| || | || || |||||||||||| ||||| | || |||||
Sbjct 582522 TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGCGTACCAAAT 582463
Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856
||||| | ||| | | || ||| | ||| ||| ||||||| | | || ||||||
Sbjct 582462 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 582405
Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916
|| || || || || | | |||||||| || || || ||| || ||||| |
Sbjct 582404 CGATAATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCAGCAACGT 582345
Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973
|||| | || ||| | ||||| | || ||||| ||||| ||||| ||||
Sbjct 582344 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 582288
Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033
| || || || |||||| ||||| || ||||||| ||||| ||||| ||| |
Sbjct 582287 ACAAGACCTTGCGTTGACCTGGCTTAAACCCATCAATTACAGAGGGAATAGAGCGCACGT 582228
Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092
||| | |||||| | || | ||||||| ||||| | | || |||| || |||
Sbjct 582227 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAATCCTCGATCGGG-ACTTCG 582169
Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150
| | ||||||| || | | || || || | ||| || | ||| |||||||| |
Sbjct 582168 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 582111
Query 282151 CCTCGGCCCGAGTCTTGTTGAA 282172
|||||| ||||||||||
Sbjct 582110 TGTCGGCCTTCTTCTTGTTGAA 582089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823173244430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |