Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq16 102 6e-17 >seq16 Length=975364 Score = 102 bits (112), Expect = 6e-17 Identities = 226/337 (67%), Gaps = 4/337 (1%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||| ||||| || || || || ||| | | | | | Sbjct 264720 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 264779 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 || | || || || ||||| || || | |||||| | | |||| ||||| Sbjct 264780 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCATCCTTGGCTGTCCTATACTCTGCG 264839 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106 || ||||||||||| || || ||||| || ||||| | ||| || || || || | | Sbjct 264840 CCAAAATGCCTCCATTGGAACCCATAAACTGGTCCCAAATCCCCCTCTTCCCTATGACCC 264899 Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166 || |||| ||| || ||||| ||| ||||||||| |||||||||| | || || || Sbjct 264900 AACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCC--CT 264957 Query 102167 GCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 || || | ||| || || ||||||| | ||||| | ||||| || | | Sbjct 264958 TCTCGGACAATGATTTAGAATCGGTCGATCCTCGAACGAACCAAAGTAGTTCCTCGATGA 265017 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 ||||| | ||| ||| |||| ||||| ||||| || Sbjct 265018 TACCTCGCGTAAAGACTTTCTTGGTAGTCAAAAGGGG 265054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250931432311