Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq24 105 6e-18 seq47 104 2e-17 seq10 104 2e-17 >seq24 Length=1725410 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| || | || ||||||||||||||||| || || || Sbjct 1413371 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCG 1413430 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| || | || || | |||||||| || Sbjct 1413431 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 1413490 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || | ||| Sbjct 1413491 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 1413550 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCA 21174 || | ||| ||||||||||| || | || |||||||| ||||||| Sbjct 1413551 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 1413596 >seq47 Length=1359276 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | |||||||| |||| || |||||||| || ||||| || || || Sbjct 567703 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 567644 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| |||||||| | || | || ||||||||| ||| Sbjct 567643 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 567584 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| || || || ||| Sbjct 567583 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 567524 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || |||||||| Sbjct 567523 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567477 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | |||||||| || | || |||||||| || || || ||||| || Sbjct 821710 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 821651 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| ||| | || | || ||| ||||| ||| Sbjct 821650 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 821591 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | | || || || ||| Sbjct 821590 ATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 821531 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || |||||||| Sbjct 821530 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821484 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | |||||||| || | || |||||||| || ||||| || || || Sbjct 821938 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 821879 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||||||| | || || | || ||||| ||| Sbjct 821878 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 821819 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | | || || || ||| Sbjct 821818 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 821759 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || |||||||| Sbjct 821758 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821712 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| || || | ||||||| || | || |||||||| || ||||| ||||| || Sbjct 822166 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 822107 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| ||| | || | || ||| ||||| ||| Sbjct 822106 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 822047 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | | || || || ||| Sbjct 822046 ATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 821987 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || |||||||| Sbjct 821986 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821940 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | |||||||| || | || |||||||| || || || ||||| || Sbjct 567931 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 567872 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| ||| | || | || ||| ||||| ||| Sbjct 567871 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 567812 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | | || || || ||| Sbjct 567811 ATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 567752 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || || ||||| Sbjct 567751 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567705 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| ||||| || | |||||||| |||| || |||||||| || || || || || || Sbjct 568160 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 568101 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || || | ||||| ||||| ||||| || | || || | || ||||| ||| Sbjct 568100 GAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGG 568041 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||| |||||||| ||||| || || | | | | || || || ||| Sbjct 568040 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 567981 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || |||||||| Sbjct 567980 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567933 >seq10 Length=1963216 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| |||| ||| | || ||||||||||| ||||| ||||| ||| Sbjct 1805562 CCACCTCGGAGGCGGAGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 1805621 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || | ||||| ||||| ||||| || | || || | |||||||| || Sbjct 1805622 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 1805681 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || | ||| Sbjct 1805682 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 1805741 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGC 21173 || | ||| || |||||||| || | || |||||||| |||||| Sbjct 1805742 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 1805786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258886076676