Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq47 105 4e-18
seq10 105 4e-18
>seq47
Length=1359276
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || || ||||| |||||||| |||| ||| ||| | ||
Sbjct 567688 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 567629
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| || | ||||||||||| ||| | || |||||||||
Sbjct 567628 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 567569
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | |||| || | || ||||| || | |||||| ||
Sbjct 567568 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 567509
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || || || ||||| ||||||
Sbjct 567508 TTGCCGGTCAGGGTCTTGACGAAGATTTGCATC 567476
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | |||||||| ||| | || || ||||| |||||||||||||
Sbjct 822166 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 822107
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| ||| | || || | ||||||||| || || || | ||||| ||||| |||
Sbjct 822106 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 822047
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA--TCGGCTATCGAATCGGTCGATTCGA 34340
| | ||||||||| || | ||| ||| || | | | |||| || | || ||||
Sbjct 822046 ATACCCTCCTTGTC--CTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGA 821989
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | |||||| || |||||||| || || || || ||||| |||||
Sbjct 821988 CCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821940
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || || ||||| || |||||||||| ||| ||| | ||
Sbjct 567916 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCC 567857
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| || || || | ||||| ||||| ||| | | |||||||||
Sbjct 567856 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 567797
Query 34298 GCTATCTTTTGCTTTAGA--TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
||||| | ||| || | | | |||| || | || ||||| || | |||||| |
Sbjct 567796 TGGATCTT--GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCG 567739
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||||||| || || || || |||||||||||
Sbjct 567738 TCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567705
>seq10
Length=1963216
Score = 105 bits (116), Expect = 4e-18
Identities = 141/191 (74%), Gaps = 4/191 (2%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
|| || || ||||||||||||| | || || ||| | || || | ||||||||| |||||
Sbjct 1805598 TCCTTTTGGATGTTGTAGTCGGCCAAGGTG-CGGCCATCCTCGAGCTGCTTGCCGGCGAA 1805656
Query 34258 AATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316
||||| || |||||||| | |||| | || |||||||| ||||| ||| | |
Sbjct 1805657 GATGAGACGTTGCTGGTCTGGCGGG-ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGT 1805715
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| | |||| |||| ||| ||||| || | ||||| || ||||| || ||||| || |
Sbjct 1805716 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 1805775
Query 34377 CAAAGATCTGC 34387
||||||| |||
Sbjct 1805776 CAAAGATTTGC 1805786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071759816160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |