Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq28 127 3e-24
>seq28
Length=749551
Score = 127 bits (140), Expect = 3e-24
Identities = 417/643 (65%), Gaps = 4/643 (1%)
Strand=Plus/Minus
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307
||| || ||| | ||| || || | ||| |||||||| |||||||| || || | |||
Sbjct 3965 CCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAA 3906
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367
||||| | | | |||||| || || ||||| ||| || |||||| | |
Sbjct 3905 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 3846
Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
| |||| |||||||| || | ||| || || | |||| || || ||||| || ||
Sbjct 3845 GACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 3786
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
|| || | ||| | ||||||||||| || || | | ||| || | || ||||| ||
Sbjct 3785 TTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 3726
Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547
|| || || |||| || ||| || | || || || || || | |||
Sbjct 3725 GTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACC 3666
Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCATAGATGCCTT 63606
|| || || || | || ||||| | ||||| ||| || | |||||| ||||||||||
Sbjct 3665 GATACCACCGGCGGTCTTGGAGATGAGAGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTT 3607
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666
| || |||||| |||| | | | ||||| || | || | ||| ||||
Sbjct 3606 CGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTC 3547
Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726
| || || || | || || || ||||| ||||| | || || | || |||||||
Sbjct 3546 CGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACG 3487
Query 63727 TCT-CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63785
|| ||| | | || || || ||||| || || ||||||||||| | ||||
Sbjct 3486 ACTGCAAGA-CGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATG 3428
Query 63786 TGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63845
||||| || | ||| | | ||| || || | ||||||||| || | |||
Sbjct 3427 TGCTGCGGGCGTTCGGCGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTT 3368
Query 63846 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63888
|| || ||||| |||||||| || || || ||||| ||||
Sbjct 3367 TTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAA 3325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817119764080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |