Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq28 109 8e-19 >seq28 Length=749551 Score = 109 bits (120), Expect = 8e-19 Identities = 404/625 (65%), Gaps = 6/625 (1%) Strand=Plus/Minus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 || || | ||| |||||||| |||||||| || || | ||| ||||| | | | Sbjct 3946 ACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGCGGACT 3887 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 ||||| || || ||||| ||| || |||||| | | | |||| |||||||| Sbjct 3886 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGC 3827 Query 80059 TCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 80118 || | ||| || || | |||| || || ||||| || || || || | ||| | ||| Sbjct 3826 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 3767 Query 80119 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA-CCATTGGTCCCGGA 80177 |||||||| || || | | ||| || | || || || || ||| || || || |||| Sbjct 3766 GTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGA-GTAGCCGTTCGTGCCGGC 3708 Query 80178 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 80237 || ||| || | || || || || || | ||| || || || || | || Sbjct 3707 AATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTT 3648 Query 80238 AGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCA 80296 ||||| | ||||| ||| || | ||| || |||||||| || || |||||| ||| Sbjct 3647 GGAGATGAGAGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCA 3589 Query 80297 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 80356 | | | | ||||| || | || | || ||||| || || || | || | Sbjct 3588 TCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCG 3529 Query 80357 GAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT-CAATAGCTGATTCT 80415 | || ||||| ||||| | || |||| || ||||||| || ||| | | || Sbjct 3528 GCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACGACTGCAAGA-CGCGCTCG 3470 Query 80416 ATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACG 80475 || || ||||| || || ||||||||||| | ||||||||| || | ||| || Sbjct 3469 ATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCGTTCGGCG 3410 Query 80476 ATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 80535 | |||| | || | |||||| || || | ||||| || ||||| |||||| Sbjct 3409 ACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTG 3350 Query 80536 TATGAAAAGTCTCGTTCGTAAATAA 80560 || || || || ||||| |||| Sbjct 3349 TAGCCGAAATCGCGGTCGTAGATAA 3325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268252320040