Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq28 113 6e-20 >seq28 Length=749551 Score = 113 bits (124), Expect = 6e-20 Identities = 405/627 (65%), Gaps = 10/627 (2%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || | ||| |||||||| |||||||| || || | ||| ||||| | | | Sbjct 3946 ACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGCGGACT 3887 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| || || ||||| ||| || |||||| | | | |||| |||||||| Sbjct 3886 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGC 3827 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 || | ||| || || | |||| || || ||||| || || || || | ||| | ||| Sbjct 3826 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 3767 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 |||||||| || || | | ||| || | || || || || || || || |||| Sbjct 3766 GTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCA 3707 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 || ||| || | || || || ||| || | ||| || || || || | || Sbjct 3706 ATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTG 3647 Query 72322 GAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 ||||| | ||||| ||| || | ||| || |||||||| || || ||||||| |||| Sbjct 3646 GAGATGAGAGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCAT 3588 Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440 | | | ||||| || | || | || ||||| || || || | || || Sbjct 3587 CGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGG 3528 Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT-CAATAGCTGATTCTA 72499 || ||||| ||||| | || |||| || ||||||| || ||| | | || | Sbjct 3527 CGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACGACTGCAAGA-CGCGCTCGA 3469 Query 72500 TATC---CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAA 72556 | || || ||| || || || ||||||||||| | ||| ||||| || | ||| Sbjct 3468 TGTCGTGCCCGTGA---ATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCGTTCGG 3412 Query 72557 CGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 72616 ||| |||| | || | ||||||||| || | ||||| || ||||| |||| Sbjct 3411 CGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGT 3352 Query 72617 TGTATGAAAAGTCTCGTTCGTAAATAA 72643 |||| || || || ||||| |||| Sbjct 3351 TGTAGCCGAAATCGCGGTCGTAGATAA 3325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138688256360