Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq28 118 2e-21
seq16 113 7e-20
>seq28
Length=749551
Score = 118 bits (130), Expect = 2e-21
Identities = 345/529 (65%), Gaps = 2/529 (0%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| |||||| || | | ||| | || || |||||| | | |||||| | | ||
Sbjct 3714 ACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATAACACCGCGCGC 3773
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
||||| || || ||||| || || || || || | || ||||| | || || |||
Sbjct 3774 TACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGG 3833
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| ||||| || || || | || | ||||| ||| ||| || || | ||
Sbjct 3834 CACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGC 3893
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
|| | || | |||| || |||||| | || ||| | |||||| |||| ||| | | |
Sbjct 3894 GCTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCC 3953
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
| ||| ||||| ||| | ||||||| | | |||||||| ||| || |||
Sbjct 3954 GCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAAGTCTATGGC 4013
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGAGT 97165
|||||||| ||||| || | | ||||| | ||||| || | | |||||| |
Sbjct 4014 GAAGAGTTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAAGACGA-T 4072
Query 97166 CGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTA 97225
| || | | | || ||| | || || | ||| ||||| || ||||| | || |
Sbjct 4073 CCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTT 4132
Query 97226 CATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAA 97285
||| ||||||||||| ||| || || |||||| || | ||||| |||||
Sbjct 4133 CATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAA 4192
Query 97286 GGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
| || ||| ||||||| || || | |||||| | | |||||||||
Sbjct 4193 GTCGTCGAATTTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAG 4241
Score = 96.9 bits (106), Expect = 5e-15
Identities = 132/181 (73%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096
||||||||||| ||||||||| | || ||||| | |||||| || | ||||| ||
Sbjct 5158 ATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCGGCCGATCGA 5217
Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156
|||| || |||||||||| |||||| |||| | || ||| ||||||| | | |
Sbjct 5218 GGTGCCTTCATTGACCAGTCGCAATCGCTCAACATCCAC-TTGTCGAGCCCGACGA-TGG 5275
Query 98157 CGTA--TGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACT 98214
|| | | || ||||| ||||| |||| ||||| || || |||||||| |||||||
Sbjct 5276 CGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGTATGTACT 5335
Query 98215 A 98215
|
Sbjct 5336 A 5336
>seq16
Length=975364
Score = 113 bits (124), Expect = 7e-20
Identities = 175/243 (72%), Gaps = 8/243 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||| | |||||| ||||| |||| ||||||||||| | ||||||| | || ||
Sbjct 134260 ATCTGGGCACAGTACAAGAAGGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACTTG 134319
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||||||||| || |||| ||||| || | | | || ||||| | || || ||
Sbjct 134320 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 134378
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||| | | ||||| || |||| |||||| || ||||||||||| || || | ||
Sbjct 134379 GCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCG 134438
Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254
||||||| ||| | ||| || | |||| ||| ||||| ||||| || ||||||||
Sbjct 134439 ATTCTCTGGTGAG--GTCCAGTCAGCCGAGG-CTCGATGCTTCTACGGTTTTCAAATCAT 134495
Query 125255 GAT 125257
|||
Sbjct 134496 GAT 134498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058634942360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |