Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq28 206 7e-48
>seq28
Length=749551
Score = 206 bits (228), Expect = 7e-48
Identities = 509/767 (66%), Gaps = 4/767 (1%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| |||| || | | ||| || ||||| | | | || ||| | || ||
Sbjct 3513 TTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCG 3572
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | | |||||||| ||||| ||||| || |||| ||||| || ||||
Sbjct 3573 TG-TTTCTTGGTCACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCAAGAC 3631
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|| ||||| || ||||||| || || || || ||| | |||||||| | || ||
Sbjct 3632 GTGCGCTCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGC 3691
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | | |||||| |||||| || |||||||| || | || |||||||| |
Sbjct 3692 GACCGG-CTCCTACATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCC 3750
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| | | || || ||| | ||||||||||| ||||| ||||| || || |
Sbjct 3751 GTGTCTACAATAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCT 3810
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
| || || || |||||||| || || || | || ||||| || || || || || |
Sbjct 3811 TCGCGATCTACCTCGAGCCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGA 3870
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || || |||||| | || || |||||||| || | || || ||| || | || |
Sbjct 3871 ACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATC 3930
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024
|| ||| |||| || ||||| | | ||| | ||||| ||||| |||| |
Sbjct 3931 TCTTCATGGAGCGTGTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCC 3990
Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084
| ||||| ||| || | || || || | || | | ||| || || ||| ||
Sbjct 3991 CCGGTCTCCACGAAGTCTATGGCGAAGAGTTCAAGGCCTTGTTCGAGAAATACGAAAAGG 4050
Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144
|||| || ||||| || ||||| || ||||| |||| || || | || | |
Sbjct 4051 AGGGTCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCC 4110
Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204
|| | || || || | |||| ||| | ||||| || | ||| || || ||||
Sbjct 4111 AGGTCGAAACTGGCAACCCCTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACC 4170
Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCG 364264
| || ||||||| || || || | || | || |||||||| || || ||| | |
Sbjct 4171 AAAAGAACCTTGGCACGATCAAGTCGTCGAATTTGTGCACCGAGATCATCGAGTACTCGG 4230
Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311
| || |||||| ||||| || ||| | || ||||||||| | |||
Sbjct 4231 CGCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCG 4277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352581347702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |