Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq28 206 7e-48 >seq28 Length=749551 Score = 206 bits (228), Expect = 7e-48 Identities = 509/767 (66%), Gaps = 4/767 (1%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| |||| || | | ||| || ||||| | | | || ||| | || || Sbjct 3513 TTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCG 3572 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | | |||||||| ||||| ||||| || |||| ||||| || |||| Sbjct 3573 TG-TTTCTTGGTCACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCAAGAC 3631 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 || ||||| || ||||||| || || || || ||| | |||||||| | || || Sbjct 3632 GTGCGCTCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGC 3691 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | | |||||| |||||| || |||||||| || | || |||||||| | Sbjct 3692 GACCGG-CTCCTACATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCC 3750 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| | | || || ||| | ||||||||||| ||||| ||||| || || | Sbjct 3751 GTGTCTACAATAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCT 3810 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 | || || || |||||||| || || || | || ||||| || || || || || | Sbjct 3811 TCGCGATCTACCTCGAGCCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGA 3870 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || |||||| | || || |||||||| || | || || ||| || | || | Sbjct 3871 ACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATC 3930 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || ||| |||| || ||||| | | ||| | ||||| ||||| |||| | Sbjct 3931 TCTTCATGGAGCGTGTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCC 3990 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 | ||||| ||| || | || || || | || | | ||| || || ||| || Sbjct 3991 CCGGTCTCCACGAAGTCTATGGCGAAGAGTTCAAGGCCTTGTTCGAGAAATACGAAAAGG 4050 Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 |||| || ||||| || ||||| || ||||| |||| || || | || | | Sbjct 4051 AGGGTCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCC 4110 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 || | || || || | |||| ||| | ||||| || | ||| || || |||| Sbjct 4111 AGGTCGAAACTGGCAACCCCTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACC 4170 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCG 364264 | || ||||||| || || || | || | || |||||||| || || ||| | | Sbjct 4171 AAAAGAACCTTGGCACGATCAAGTCGTCGAATTTGTGCACCGAGATCATCGAGTACTCGG 4230 Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 | || |||||| ||||| || ||| | || ||||||||| | ||| Sbjct 4231 CGCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCG 4277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352581347702