Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq28 122 1e-22 >seq28 Length=749551 Score = 122 bits (134), Expect = 1e-22 Identities = 418/644 (65%), Gaps = 6/644 (1%) Strand=Plus/Minus Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 ||| || ||| | ||| || || | ||| |||||||| |||||||| || || | ||| Sbjct 3965 CCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAA 3906 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||| | | | |||||| || || ||||| ||| || |||||| | | Sbjct 3905 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 3846 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 | |||| |||||||| || | ||| || || | |||| || || ||||| || || Sbjct 3845 GACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 3786 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 || || | ||| | ||||||||||| || || | | ||| || | || || || || Sbjct 3785 TTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 3726 Query 63292 TGTA-CCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGAC 63350 ||| || || || || | || ||| || | || || || || || | || Sbjct 3725 -GTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAAC 3667 Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCC 63409 | || || || || | || ||||| | ||||| ||| || | ||| || |||||||| Sbjct 3666 CGATACCACCGGCGGTCTTGGAGATGAGAGCGCA-CGTCTTGAGCGTGTCGTAGATGCCT 3608 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469 || || ||||||| |||| | | | ||||| || | || | || ||| Sbjct 3607 TCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTT 3548 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || || || || | || || || ||||| ||||| | || || | || |||||| Sbjct 3547 CCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTAC 3488 Query 63530 GTCT-CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63588 | || ||| | | || || || ||||| || || ||||||||||| | ||| Sbjct 3487 GACTGCAAGA-CGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCAT 3429 Query 63589 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63648 |||||| || | ||| ||| |||| || || | ||||||||| || | || Sbjct 3428 GTGCTGCGGGCGTTCGGCGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGT 3369 Query 63649 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63692 ||| || ||||| |||||||| || || || ||||| |||| Sbjct 3368 TTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAA 3325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631516855600