Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq47 113 4e-20
>seq47
Length=1359276
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||||| || | ||||| |||| || ||||| ||
Sbjct 821484 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 821543
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || |||| || ||| | || ||||| || || ||||| || ||
Sbjct 821544 GACACGATTGACAACGTCAA--AACCAAGA--TCCAGGACAAGGAGGGTATTCCCCCAGA 821599
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||||| | || ||||| ||||| || | || |||| ||||| | | ||| ||
Sbjct 821600 CCAACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTA 821659
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||| || || || || ||||| || || ||||| | || |||||||
Sbjct 821660 CAATATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 821710
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||||| || | ||||| |||| || ||||| ||
Sbjct 567933 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 567992
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || |||| | || || | ||| ||||| || || ||||| || ||
Sbjct 567993 GACACGATTGACAACGTCA---AGGCCAAGATTCAG-GACAAGGAGGGCATTCCCCCAGA 568048
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||| || | || || || ||||| || | || |||| ||||| | | ||||||
Sbjct 568049 CCAACAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTA 568108
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226
|||||| || || || || ||||| || || ||||| | || |||| |||
Sbjct 568109 CAATATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGGA 568160
Score = 109 bits (120), Expect = 5e-19
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||||| || | ||||| |||| || ||||| ||
Sbjct 567705 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 567764
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || |||| || ||| | || ||||| || || ||||| || ||
Sbjct 567765 GACACGATTGACAACGTCAA--AACCAAGA--TCCAGGACAAGGAGGGTATTCCCCCAGA 567820
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||||| | || ||||| ||||| || | || |||| ||||| | | ||| ||
Sbjct 567821 CCAACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTA 567880
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||| || || || || ||||| || || ||||| | || |||||||
Sbjct 567881 CAATATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 567931
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||||| || | ||||| |||| || ||||| ||
Sbjct 821940 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 821999
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || |||| || ||| | || ||||| || || ||||| || ||
Sbjct 822000 GACACGATTGACAACGTCAA--AACCAAGA--TCCAGGACAAGGAGGGTATTCCCCCAGA 822055
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||||| | || ||||| ||||| || | || |||| ||||| | | ||| ||
Sbjct 822056 CCAACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTA 822115
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || || || || ||||| || || |||||
Sbjct 822116 CAACATCCAGAAGGAGTCGACGCTCCACTTGGTGCT 822151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327677847715
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |