Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq47 127 2e-24
seq24 122 7e-23
seq10 122 7e-23
>seq47
Length=1359276
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| || || || || | ||||| || ||| |||| || || || || ||
Sbjct 821254 AGATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCT 821313
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| | ||||| || || || ||||||||||||||||| || || |
Sbjct 821314 CGGACACGATTGACAACGTCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACC 821373
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
|||||||||| || || || ||||| ||| | |||||| ||||| || |||||||||
Sbjct 821374 AACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACGCTCGCCGATTACA 821433
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||| || || || || || | || || || | || | || ||||||
Sbjct 821434 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGGT 821483
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | ||||| || ||| |||| || || || || || |
Sbjct 821712 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 821771
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || || |||||||||||||| ||||| || || |||
Sbjct 821772 GACACGATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 821831
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || ||||| ||||| ||| | |||||| |||||| || |||||||||||
Sbjct 821832 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 821891
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | || || || | || | || ||||||
Sbjct 821892 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGGT 821939
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | ||||| || ||| |||| || || || || || |
Sbjct 567933 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 567992
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||| ||||||||||| ||||| || || |||
Sbjct 567993 GACACGATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 568052
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || || ||||| ||| | |||||| |||||| || ||||||||||
Sbjct 568053 CAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCGCCGATTACAAT 568112
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 568113 ATCCAGAAGGAGTCGAC 568129
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | ||||| || ||| |||| || || || || || |
Sbjct 821940 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 821999
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| || || || ||||||||||||||||| || || |||
Sbjct 822000 GACACGATTGACAACGTCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 822059
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||| ||||| ||| | |||||| |||||| || |||| ||||||
Sbjct 822060 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 822119
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | || || || |||| | || || |||
Sbjct 822120 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGGGGT 822167
Score = 109 bits (120), Expect = 5e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 22211 TTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGG 22270
|||| |||||||||| || || || || | ||||| || ||| |||| || || || |
Sbjct 567469 TTGTTCAGATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCG 567528
Query 22271 AAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCAC 22330
| || | || || | ||| | |||| || ||||| ||||||||||| ||||| |
Sbjct 567529 AGTCCTCGGACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCC 567588
Query 22331 CCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCG 22390
| || || || || | || || || ||||| ||| | |||||| |||||| || |||
Sbjct 567589 CAGACCAGCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCG 567648
Query 22391 ATTACAACATTCAAAAAGAATCCAC 22415
|||||||||| || || || || ||
Sbjct 567649 ATTACAACATCCAGAAGGAGTCGAC 567673
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | ||||| || ||| |||| || || || || || |
Sbjct 821484 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 821543
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| || || || ||||||||||||||||| || || |||
Sbjct 821544 GACACGATTGACAACGTCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 821603
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||| ||||| ||| | |||||| |||||| || |||| |||||
Sbjct 821604 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAT 821663
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | || || || | || | || ||||||
Sbjct 821664 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGGT 821711
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || ||| |||| || || || || || |
Sbjct 567705 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 567764
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| || || || ||||||||||||||||| || || |||
Sbjct 567765 GACACGATTGACAACGTCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 567824
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||| ||||| ||| | |||||| |||||| || |||| |||||
Sbjct 567825 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAT 567884
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | || || || | || | || ||||||
Sbjct 567885 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGGT 567932
>seq24
Length=1725410
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279
||||||| ||||| || || | || || || || |||| || || || || | |||
Sbjct 1413596 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1413537
Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339
| || | ||| | |||| || || ||||||||||| || || || || || || |
Sbjct 1413536 ACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 1413477
Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399
||||||| || || |||||||| ||| | |||||| |||||| || ||||||||||||
Sbjct 1413476 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAACA 1413417
Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||| || || ||| | || || || | || |||| || |||
Sbjct 1413416 TTCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGGT 1413370
>seq10
Length=1963216
Score = 122 bits (134), Expect = 7e-23
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280
|||||| ||||| || ||| | || || || ||| |||| || || || || | ||||
Sbjct 1805786 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 1805727
Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340
|| | ||| | |||| || || ||||||||||| || || || || || || ||
Sbjct 1805726 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 1805667
Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400
|||||| || || |||||||| ||| | |||||| ||||||| | |||| ||||||||
Sbjct 1805666 ACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 1805607
Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || ||| | ||||| ||
Sbjct 1805606 CCAAAAGGAGTCGACCCTCCATTTGGT 1805580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727687958465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |