Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq28 351 2e-91 seq16 131 3e-25 >seq28 Length=749551 Score = 351 bits (388), Expect = 2e-91 Identities = 843/1264 (67%), Gaps = 30/1264 (2%) Strand=Plus/Minus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 |||| ||||||| |||||||||||||||||| |||||| | | ||| |||| | Sbjct 4540 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCCTCGGGC 4481 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || || ||| |||||| ||||||| || || ||||| ||||||||| Sbjct 4480 GAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCTAGACCTTGCACTCCGATGCCG 4421 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || ||||||| | || ||| ||||| || ||||| ||||| Sbjct 4420 ATGGGGCGGTGACGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCG 4361 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630 || | ||| | |||| | || | |||||| ||| || | || ||||||| Sbjct 4360 ATGATGCGGTTCAAGTTGAAAGCGACAACCTTGACGACCTCGTGCAACTTCTTAAAGTCG 4301 Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690 ||| || | | || || ||| ||| ||| || | ||| |||| Sbjct 4300 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 4259 Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750 | |||||||||||| ||| |||| | ||||| || ||||||||||| | || Sbjct 4258 AAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAAATTC 4199 Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810 ||||||| ||||| |||| || || || || || ||| ||||||||||||| Sbjct 4198 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAG 4139 Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870 ||||||||||| || || |||| |||||| |||| | || ||| || | Sbjct 4138 AGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGC 4079 Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930 || || |||| | || ||||| ||||| | ||| ||||| |||| Sbjct 4078 GCGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAACAAGGCCTTGAAC 4019 Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990 || ||| |||| |||| || |||||| || ||||| | ||| ||| ||| Sbjct 4018 TCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCG 3959 Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050 ||| || ||| ||| | || ||||||||| ||||| |||||||| ||| ||||| || Sbjct 3958 CCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCA 3899 Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110 | | | || ||| ||| |||||| | || |||| || || |||||||| Sbjct 3898 CGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCA 3839 Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCC 245170 ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || ||||| Sbjct 3838 GCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCG 3779 Query 245171 ACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 || | | || ||| ||| || || | || || |||||||| |||| |||| Sbjct 3778 ACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCG 3719 Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290 || ||||| ||||||| ||| | | | || |||| |||| || || | || Sbjct 3718 TTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCA 3659 Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350 |||||| |||||||||||| ||||| |||||| ||||| ||||| || || Sbjct 3658 CCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAA 3599 Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410 || |||||| ||| || || || || || ||||| || | || | | | |||| Sbjct 3598 TCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTG 3539 Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGAG 245469 || || || || ||||||||||||||| | |||| || | || ||||| ||| | Sbjct 3538 AAGAGCGTCGGCGAGGCGTGGGTAAAGTA-CCGCTCGGACATGAGGTTGTACGACTGCA- 3481 Query 245470 CAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG- 245526 ||| ||| ||||||| || ||||| || | |||| | |||||| ||||||| Sbjct 3480 -AGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATGTGCTGC 3422 Query 245527 GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584 |||||| ||| | | || | ||| | |||| |||||||||||||||||| ||| Sbjct 3421 GGGCGT-TCG--GCGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTG 3365 Query 245585 AACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTCG 245644 || |||||||| |||||| || ||| || || | ||||| || ||| | ||| Sbjct 3364 AAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTCG 3305 Query 245645 GCGT 245648 |||| Sbjct 3304 GCGT 3301 >seq16 Length=975364 Score = 131 bits (144), Expect = 3e-25 Identities = 187/260 (72%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803 ||| | ||||| |||||||||||||||||| || | | |||||||||| | |||||| Sbjct 134984 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 135043 Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 || ||||| |||||| | |||||||| || || | |||||||| |||||| ||||| Sbjct 135044 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 135103 Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922 || ||||||| || ||| |||| || ||| | |||||||| |||||| Sbjct 135104 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATCAAGGAGGC 135159 Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982 ||| || || |||||||| ||| | || || | || ||| || |||||||||| Sbjct 135160 CGTCGAAATTGAGAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 135219 Query 42983 CCACGACCTCATGTGCAAGT 43002 | | ||||||||| ||| Sbjct 135220 TGCCAAGCTCATGTGCCAGT 135239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338479941360