Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq28 351 2e-91
seq16 131 3e-25
>seq28
Length=749551
Score = 351 bits (388), Expect = 2e-91
Identities = 843/1264 (67%), Gaps = 30/1264 (2%)
Strand=Plus/Minus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| ||||||| |||||||||||||||||| |||||| | | ||| |||| |
Sbjct 4540 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCCTCGGGC 4481
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||| || || ||| |||||| ||||||| || || ||||| |||||||||
Sbjct 4480 GAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCTAGACCTTGCACTCCGATGCCG 4421
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || ||||||| | || ||| ||||| || ||||| |||||
Sbjct 4420 ATGGGGCGGTGACGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCG 4361
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | |||||| ||| || | || |||||||
Sbjct 4360 ATGATGCGGTTCAAGTTGAAAGCGACAACCTTGACGACCTCGTGCAACTTCTTAAAGTCG 4301
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
||| || | | || || ||| ||| ||| || | ||| ||||
Sbjct 4300 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 4259
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||||||||| ||| |||| | ||||| || ||||||||||| | ||
Sbjct 4258 AAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAAATTC 4199
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
||||||| ||||| |||| || || || || || ||| |||||||||||||
Sbjct 4198 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAG 4139
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870
||||||||||| || || |||| |||||| |||| | || ||| || |
Sbjct 4138 AGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGC 4079
Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930
|| || |||| | || ||||| ||||| | ||| ||||| ||||
Sbjct 4078 GCGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAACAAGGCCTTGAAC 4019
Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990
|| ||| |||| |||| || |||||| || ||||| | ||| ||| |||
Sbjct 4018 TCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCG 3959
Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050
||| || ||| ||| | || ||||||||| ||||| |||||||| ||| ||||| ||
Sbjct 3958 CCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCA 3899
Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110
| | | || ||| ||| |||||| | || |||| || || ||||||||
Sbjct 3898 CGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCA 3839
Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCC 245170
||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || |||||
Sbjct 3838 GCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCG 3779
Query 245171 ACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230
|| | | || ||| ||| || || | || || |||||||| |||| ||||
Sbjct 3778 ACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCG 3719
Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290
|| ||||| ||||||| ||| | | | || |||| |||| || || | ||
Sbjct 3718 TTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCA 3659
Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350
|||||| |||||||||||| ||||| |||||| ||||| ||||| || ||
Sbjct 3658 CCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAA 3599
Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410
|| |||||| ||| || || || || || ||||| || | || | | | ||||
Sbjct 3598 TCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTG 3539
Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGAG 245469
|| || || || ||||||||||||||| | |||| || | || ||||| ||| |
Sbjct 3538 AAGAGCGTCGGCGAGGCGTGGGTAAAGTA-CCGCTCGGACATGAGGTTGTACGACTGCA- 3481
Query 245470 CAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG- 245526
||| ||| ||||||| || ||||| || | |||| | |||||| |||||||
Sbjct 3480 -AGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATGTGCTGC 3422
Query 245527 GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584
|||||| ||| | | || | ||| | |||| |||||||||||||||||| |||
Sbjct 3421 GGGCGT-TCG--GCGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTG 3365
Query 245585 AACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTCG 245644
|| |||||||| |||||| || ||| || || | ||||| || ||| | |||
Sbjct 3364 AAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTCG 3305
Query 245645 GCGT 245648
||||
Sbjct 3304 GCGT 3301
>seq16
Length=975364
Score = 131 bits (144), Expect = 3e-25
Identities = 187/260 (72%), Gaps = 5/260 (2%)
Strand=Plus/Plus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | ||||| |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 134984 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 135043
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| |||||| | |||||||| || || | |||||||| |||||| |||||
Sbjct 135044 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 135103
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922
|| ||||||| || ||| |||| || ||| | |||||||| ||||||
Sbjct 135104 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATCAAGGAGGC 135159
Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982
||| || || |||||||| ||| | || || | || ||| || ||||||||||
Sbjct 135160 CGTCGAAATTGAGAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 135219
Query 42983 CCACGACCTCATGTGCAAGT 43002
| | ||||||||| |||
Sbjct 135220 TGCCAAGCTCATGTGCCAGT 135239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338479941360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |